登録情報 | データベース: EMDB / ID: EMD-42501 |
---|
タイトル | Spo11 core complex with hairpin DNA |
---|
マップデータ | |
---|
試料 | - 複合体: Spo11 core complex bound to gapped DNA
- タンパク質・ペプチド: Meiosis-specific protein SPO11
- タンパク質・ペプチド: Meiotic recombination protein REC102
- タンパク質・ペプチド: Antiviral protein SKI8
- タンパク質・ペプチド: Meiotic recombination protein REC104
- DNA: Hairpin DNA
- リガンド: MAGNESIUM ION
|
---|
キーワード | Spo11 / Rec102 / Rec104 / Ski8 / DNA binding / Cross over. / DNA BINDING PROTEIN |
---|
機能・相同性 | 機能・相同性情報
meiotic DNA double-strand break processing / Ski complex / mRNA decay by 3' to 5' exoribonuclease / protein-DNA complex assembly / meiotic DNA double-strand break formation / nuclear-transcribed mRNA catabolic process, 3'-5' exonucleolytic nonsense-mediated decay / Cdc73/Paf1 complex / nuclear-transcribed mRNA catabolic process, non-stop decay / : / DNA end binding ...meiotic DNA double-strand break processing / Ski complex / mRNA decay by 3' to 5' exoribonuclease / protein-DNA complex assembly / meiotic DNA double-strand break formation / nuclear-transcribed mRNA catabolic process, 3'-5' exonucleolytic nonsense-mediated decay / Cdc73/Paf1 complex / nuclear-transcribed mRNA catabolic process, non-stop decay / : / DNA end binding / synaptonemal complex assembly / homologous chromosome pairing at meiosis / reciprocal meiotic recombination / DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity / DNA topoisomerase (ATP-hydrolysing) / nuclear chromosome / sporulation resulting in formation of a cellular spore / mRNA catabolic process / condensed nuclear chromosome / protein-containing complex assembly / defense response to virus / chromatin binding / DNA binding / nucleoplasm / ATP binding / nucleus / metal ion binding類似検索 - 分子機能 Meiotic recombination protein Rec104 / : / Meiotic recombination protein REC104 / Topoisomerase 6 subunit A/Spo11, Toprim domain / REC102 protein / Topoisomerase (Topo) IIB-type catalytic domain profile. / Spo11/DNA topoisomerase VI subunit A / Spo11/DNA topoisomerase VI, subunit A, N-terminal / Topoisomerase 6 subunit A/Spo11, TOPRIM domain / Spo11/DNA topoisomerase VI subunit A superfamily ...Meiotic recombination protein Rec104 / : / Meiotic recombination protein REC104 / Topoisomerase 6 subunit A/Spo11, Toprim domain / REC102 protein / Topoisomerase (Topo) IIB-type catalytic domain profile. / Spo11/DNA topoisomerase VI subunit A / Spo11/DNA topoisomerase VI, subunit A, N-terminal / Topoisomerase 6 subunit A/Spo11, TOPRIM domain / Spo11/DNA topoisomerase VI subunit A superfamily / Type IIB DNA topoisomerase / WD40 repeat, conserved site / Trp-Asp (WD) repeats signature. / Trp-Asp (WD) repeats profile. / Trp-Asp (WD) repeats circular profile. / WD domain, G-beta repeat / WD40 repeats / WD40 repeat / WD40-repeat-containing domain superfamily / Winged helix-like DNA-binding domain superfamily / WD40/YVTN repeat-like-containing domain superfamily類似検索 - ドメイン・相同性 Meiosis-specific protein SPO11 / Meiotic recombination protein REC104 / Meiotic recombination protein REC102 / Antiviral protein SKI8類似検索 - 構成要素 |
---|
生物種 | ![](img/tx_yeast.gif) Saccharomyces cerevisiae S288C (パン酵母) |
---|
手法 | 単粒子再構成法 / クライオ電子顕微鏡法 / 解像度: 3.7 Å |
---|
データ登録者 | Yu Y / Patel DJ |
---|
資金援助 | 米国, 1件 Organization | Grant number | 国 |
---|
National Institutes of Health/Eunice Kennedy Shriver National Institute of Child Health & Human Development (NIH/NICHD) | R01 HD110120 | 米国 |
|
---|
引用 | ジャーナル: To Be Published タイトル: Cryo-EM structure of the yeast Spo11 core complex bound to DNA 著者: Yu Y / Wang JC / Liu KX / Zheng Z / Patel DJ / Keeney S |
---|
履歴 | 登録 | 2023年10月26日 | - |
---|
ヘッダ(付随情報) 公開 | 2024年6月26日 | - |
---|
マップ公開 | 2024年6月26日 | - |
---|
更新 | 2024年6月26日 | - |
---|
現状 | 2024年6月26日 | 処理サイト: RCSB / 状態: 公開 |
---|
|
---|