登録情報 データベース : PDB / ID : 2xni 構造の表示 ダウンロードとリンクタイトル Protein-ligand complex of a novel macrocyclic HCV NS3 protease inhibitor derived from amino cyclic boronates 要素NS3 PROTEASE NS4A COFACTOR 詳細キーワード HYDROLASE/HYDROLASE REGULATOR / HYDROLASE-HYDROLASE REGULATOR COMPLEX / SERINE PROTEASE機能・相同性 機能・相同性情報分子機能 ドメイン・相同性 構成要素
positive regulation of hexokinase activity / modulation by virus of host cellular process / translocation of peptides or proteins into host cell cytoplasm / Toll-like receptor 2 binding / viral capsid assembly / adhesion receptor-mediated virion attachment to host cell / TBC/RABGAPs / hepacivirin / host cell mitochondrial membrane / host cell lipid droplet ... positive regulation of hexokinase activity / modulation by virus of host cellular process / translocation of peptides or proteins into host cell cytoplasm / Toll-like receptor 2 binding / viral capsid assembly / adhesion receptor-mediated virion attachment to host cell / TBC/RABGAPs / hepacivirin / host cell mitochondrial membrane / host cell lipid droplet / symbiont-mediated suppression of host TRAF-mediated signal transduction / transformation of host cell by virus / positive regulation of cytokinesis / symbiont-mediated perturbation of host cell cycle G1/S transition checkpoint / negative regulation of protein secretion / symbiont-mediated suppression of host JAK-STAT cascade via inhibition of STAT1 activity / symbiont-mediated suppression of host cytoplasmic pattern recognition receptor signaling pathway via inhibition of MAVS activity / viral process / serine-type peptidase activity / endoplasmic reticulum-Golgi intermediate compartment membrane / virion component / kinase binding / SH3 domain binding / nucleoside-triphosphate phosphatase / protein complex oligomerization / monoatomic ion channel activity / viral nucleocapsid / clathrin-dependent endocytosis of virus by host cell / entry receptor-mediated virion attachment to host cell / 加水分解酵素; プロテアーゼ; ペプチド結合加水分解酵素; システインプロテアーゼ / RNA helicase activity / host cell perinuclear region of cytoplasm / host cell endoplasmic reticulum membrane / symbiont-mediated suppression of host type I interferon-mediated signaling pathway / RNA helicase / ribonucleoprotein complex / induction by virus of host autophagy / RNA-directed RNA polymerase / viral RNA genome replication / cysteine-type endopeptidase activity / serine-type endopeptidase activity / RNA-dependent RNA polymerase activity / virus-mediated perturbation of host defense response / fusion of virus membrane with host endosome membrane / viral envelope / host cell nucleus / host cell plasma membrane / structural molecule activity / virion membrane / negative regulation of transcription by RNA polymerase II / ATP hydrolysis activity / proteolysis / RNA binding / zinc ion binding / ATP binding / metal ion binding 類似検索 - 分子機能 Thrombin, subunit H - #120 / : / Hepatitis C virus core protein, chain A superfamily / Hepatitus C virus, Non-structural 5a protein, C-terminal / Hepatitis C virus NS5A, 1B domain superfamily / Hepatitis C virus non-structural protein NS2, C-terminal domain / Hepatitis C virus non-structural protein NS2, N-terminal domain / Hepatitis C virus non-structural protein NS2 / HCV NS5a protein C-terminal region / Hepatitis C virus, Non-structural protein NS4b ... Thrombin, subunit H - #120 / : / Hepatitis C virus core protein, chain A superfamily / Hepatitus C virus, Non-structural 5a protein, C-terminal / Hepatitis C virus NS5A, 1B domain superfamily / Hepatitis C virus non-structural protein NS2, C-terminal domain / Hepatitis C virus non-structural protein NS2, N-terminal domain / Hepatitis C virus non-structural protein NS2 / HCV NS5a protein C-terminal region / Hepatitis C virus, Non-structural protein NS4b / Hepatitis C virus, Core protein, N-terminal / Hepatitis C virus non-structural protein NS4b / Hepatitis C virus capsid protein / Hepatitis C virus, Non-structural protein NS2 / Hepatitis C virus, Non-structural 5a protein / Hepatitis C virus, Non-structural 5a protein, domain 1a / Hepatitis C virus non-structural 5a, 1B domain / NS5A domain 1a superfamily / Hepatitis C virus non-structural 5a protein membrane anchor / Hepatitis C virus non-structural 5a zinc finger domain / Hepatitis C virus non-structural 5a domain 1b / Hepacivirus nonstructural protein 2 (NS2) protease domain profile. / Hepatitis C virus, Non-structural protein NS4a / Hepatitis C virus non-structural protein NS4a / Hepatitis C virus, Core protein, C-terminal / Hepatitis C virus core protein / Hepatitis C virus, Non-structural protein E2/NS1 / Hepatitis C virus non-structural protein E2/NS1 / Hepatitis C virus, Envelope glycoprotein E1 / Hepatitis C virus envelope glycoprotein E1 / RNA dependent RNA polymerase, hepatitis C virus / Viral RNA dependent RNA polymerase / Hepatitis C virus, NS3 protease, Peptidase S29 / Hepatitis C virus NS3 protease / Hepacivirus/Pegivirus NS3 protease domain profile. / DEAD box, Flavivirus / Flavivirus DEAD domain / helicase superfamily c-terminal domain / Trypsin-like serine proteases / Superfamilies 1 and 2 helicase C-terminal domain profile. / Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. / DEAD-like helicases superfamily / Helicase, C-terminal / Helicase superfamily 1/2, ATP-binding domain / Thrombin, subunit H / Reverse transcriptase/Diguanylate cyclase domain / RNA-directed RNA polymerase, catalytic domain / RdRp of positive ssRNA viruses catalytic domain profile. / Peptidase S1, PA clan, chymotrypsin-like fold / Peptidase S1, PA clan / DNA/RNA polymerase superfamily / Beta Barrel / P-loop containing nucleoside triphosphate hydrolase / Mainly Beta 類似検索 - ドメイン・相同性 Chem-TR8 / NS3 protease / Polyprotein / Genome polyprotein 類似検索 - 構成要素生物種 HEPATITIS C VIRUS (ウイルス)手法 X線回折 / シンクロトロン / OTHER / 解像度 : 3.3 Å 詳細データ登録者 Li, X. / Zhang, Y.-K. / Liu, Y. / Ding, C.Z. / Zhou, Y. / Li, Q. / Plattner, J.J. / Baker, S.J. / Zhang, S. / Kazmierski, W.M. ...Li, X. / Zhang, Y.-K. / Liu, Y. / Ding, C.Z. / Zhou, Y. / Li, Q. / Plattner, J.J. / Baker, S.J. / Zhang, S. / Kazmierski, W.M. / Wright, L.L. / Smith, G.K. / Grimes, R.M. / Crosby, R.M. / Creech, K.L. / Carballo, L.H. / Slater, M.J. / Jarvest, R.L. / Thommes, P. / Hubbard, J.A. / Convery, M.A. / Nassau, P.M. / McDowell, W. / Skarzynski, T.J. / Qian, X. / Fan, D. / Liao, L. / Ni, Z.-J. / Pennicott, L.E. / Zou, W. / Wright, J. 引用ジャーナル : Bioorg.Med.Chem.Lett. / 年 : 2010タイトル : Novel Macrocyclic Hcv Ns3 Protease Inhibitors Derived from Alpha-Amino Cyclic Boronates.著者: Li, X. / Zhang, Y. / Liu, Y. / Ding, C.Z. / Zhou, Y. / Li, Q. / Plattner, J.J. / Baker, S.J. / Zhang, S. / Kazmierski, W.M. / Wright, L.L. / Smith, G.K. / Grimes, R.M. / Crosby, R.M. / ... 著者 : Li, X. / Zhang, Y. / Liu, Y. / Ding, C.Z. / Zhou, Y. / Li, Q. / Plattner, J.J. / Baker, S.J. / Zhang, S. / Kazmierski, W.M. / Wright, L.L. / Smith, G.K. / Grimes, R.M. / Crosby, R.M. / Creech, K.L. / Carballo, L.H. / Slater, M.J. / Jarvest, R.L. / Thommes, P. / Hubbard, J.A. / Convery, M.A. / Nassau, P.M. / Mcdowell, W. / Skarzynski, T.J. / Qian, X. / Fan, D. / Liao, L. / Ni, Z.-J. / Pennicott, L.E. / Zou, W. / Wright, J. 履歴 登録 2010年8月2日 登録サイト : PDBE / 処理サイト : PDBE改定 1.0 2011年8月17日 Provider : repository / タイプ : Initial release改定 1.1 2012年9月26日 Group : Database references
すべて表示 表示を減らす Remark 700 SHEET DETERMINATION METHOD: DSSP THE SHEETS PRESENTED AS "AC" IN EACH CHAIN ON SHEET RECORDS BELOW ... SHEET DETERMINATION METHOD: DSSP THE SHEETS PRESENTED AS "AC" IN EACH CHAIN ON SHEET RECORDS BELOW IS ACTUALLY AN 6-STRANDED BARREL THIS IS REPRESENTED BY A 7-STRANDED SHEET IN WHICH THE FIRST AND LAST STRANDS ARE IDENTICAL. THE SHEETS PRESENTED AS "BC" IN EACH CHAIN ON SHEET RECORDS BELOW IS ACTUALLY AN 6-STRANDED BARREL THIS IS REPRESENTED BY A 7-STRANDED SHEET IN WHICH THE FIRST AND LAST STRANDS ARE IDENTICAL.