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TitlePhosphorylation of inner core heptose is a major determinant of bacterial surface lipopolysaccharide recognition by the innate immune protein hSP-D.
Journal, issue, pagesJ. Biol. Chem., Page 111307-111307, Year 2026
Publish dateApr 12, 2025 (structure data deposition date)
AuthorsWilliams, H.M. / Watson, A. / Madsen, J. / Clark, H.W. / Hood, D.W. / Oscarson, S. / Greenhough, T.J. / Shrive, A.K.
External linksJ. Biol. Chem. / PubMed:41724382
MethodsX-ray diffraction
Resolution1.63 - 1.92 Å
Structure data

PDB-9qvu:
Crystal structure of human lung surfactant protein D trimeric fragment with bound synthetic HepI-(1,5)-KdoI ligand
Method: X-RAY DIFFRACTION / Resolution: 1.75 Å

PDB-9qw2:
Crystal structure of human lung surfactant protein D trimeric fragment with bound synthetic HepII-HepI-PhosI ligand
Method: X-RAY DIFFRACTION / Resolution: 1.92 Å

PDB-9qw3:
Crystal structure of human lung surfactant protein D trimeric fragment with bound synthetic HepIII-HepII-HepI ligand
Method: X-RAY DIFFRACTION / Resolution: 1.63 Å

PDB-9qw4:
Crystal structure of human lung surfactant protein D trimeric fragment with bound synthetic PhosII-HepII-HepI ligand
Method: X-RAY DIFFRACTION / Resolution: 1.85 Å

Chemicals

ChemComp-CA:
Unknown entry

ChemComp-GMH:
L-glycero-alpha-D-manno-heptopyranose

ChemComp-HOH:
WATER

PDB-1jbo:
The 1.45A Three-Dimensional Structure of c-Phycocyanin from the Thermophylic Cyanobacterium Synechococcus elongatus

PDB-1jbs:
Crystal structure of ribotoxin restrictocin and a 29-mer SRD RNA analog

Source
  • homo sapiens (human)
KeywordsSURFACTANT PROTEIN / Trimeric recombinant collectin fragment / neck+CRD / alpha-helical coiled coil / carbohydrate recognition domain / lectin / sugar binding protein / alpha-helical coiled-coil

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