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Structure paper

TitleExperimental localization of metal-binding sites reveals the role of metal ions in type II DNA topoisomerases.
Journal, issue, pagesProc. Natl. Acad. Sci. USA, Vol. 121, Page e2413357121-e2413357121, Year 2024
Publish dateAug 8, 2024 (structure data deposition date)
AuthorsWang, B. / Najmudin, S. / Pan, X.S. / Mykhaylyk, V. / Orr, C. / Wagner, A. / Govada, L. / Chayen, N.E. / Fisher, L.M. / Sanderson, M.R.
External linksProc. Natl. Acad. Sci. USA / PubMed:39361644
MethodsX-ray diffraction
Resolution2.62 Å
Structure data

PDB-9gef:
Experimental localization of metal-binding sites reveals the role of metal ions in the delafloxacin-stabilized Streptococcus pneumoniae topoisomerase IV DNA cleavage complex
Method: X-RAY DIFFRACTION / Resolution: 2.62 Å

Chemicals

ChemComp-MPD:
(4S)-2-METHYL-2,4-PENTANEDIOL / precipitant*YM

ChemComp-MG:
Unknown entry

ChemComp-K:
Unknown entry

ChemComp-CL:
Unknown entry

ChemComp-ACT:
ACETATE ION

ChemComp-TE9:
delafloxacin / antibiotic*YM

ChemComp-HOH:
WATER

Source
  • streptococcus pneumoniae (bacteria)
  • escherichia coli (E. coli)
KeywordsDNA BINDING PROTEIN / metal ions; Type II topoisomerases; Fluoroquinolones; Long-wavelength X-ray crystallography

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