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Structure paper

TitleStructural Basis for Catalysis and Substrate Specificity of a LarA Racemase with a Broad Substrate Spectrum.
Journal, issue, pagesBiorxiv, Year 2024
Publish dateNov 25, 2024 (structure data deposition date)
AuthorsGatreddi, S. / Urdiain-Arraiza, J. / Desguin, B. / Hausinger, R.P. / Hu, J.
External linksBiorxiv / PubMed:39651260
MethodsX-ray diffraction
Resolution1.38 - 1.74 Å
Structure data

PDB-9eia:
A broad-substrate spectrum lactate racemase A from Isosphaera pallida in complex with copurified D-lactate
Method: X-RAY DIFFRACTION / Resolution: 1.74 Å

PDB-9eid:
A broad-substrate spectrum lactate racemase A from Isosphaera pallida in complex with D-2-Hydroxybutyrate
Method: X-RAY DIFFRACTION / Resolution: 1.38 Å

PDB-9eif:
A broad-substrate spectrum lactate racemase A from Isosphaera pallida in complex with D-2-Hydroxyisovalerate
Method: X-RAY DIFFRACTION / Resolution: 1.65 Å

Chemicals

ChemComp-EDO:
1,2-ETHANEDIOL

ChemComp-4EY:
1-[(2R,3R,4S,5R)-3,4-bis(oxidanyl)-5-(phosphonooxymethyl)oxolan-2-yl]-5-methanethioyl-pyridine-3-carbothioic S-acid

ChemComp-PEG:
DI(HYDROXYETHYL)ETHER

ChemComp-LAC:
LACTIC ACID

ChemComp-NI:
NICKEL (II) ION

ChemComp-HOH:
WATER

ChemComp-UCU:
(2R)-2-oxidanylbutanoic acid

ChemComp-PO4:
PHOSPHATE ION

ChemComp-PGE:
TRIETHYLENE GLYCOL

ChemComp-VAD:
DEAMINOHYDROXYVALINE

Source
  • isosphaera pallida (bacteria)
KeywordsISOMERASE / Catalytic activity / isomerase activity / racemase and epimerase activity racemase acting on hydroxy acids and derivatives

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