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Structure paper

TitleAntibacterial macrocyclic peptides reveal a distinct mode of BamA inhibition.
Journal, issue, pagesNat Commun, Vol. 16, Page 3395-3395, Year 2025
Publish dateJul 23, 2024 (structure data deposition date)
AuthorsWalker, M.E. / Zhu, W. / Peterson, J.H. / Wang, H. / Patteson, J. / Soriano, A. / Zhang, H. / Mayhood, T. / Hou, Y. / Mesbahi-Vasey, S. ...Walker, M.E. / Zhu, W. / Peterson, J.H. / Wang, H. / Patteson, J. / Soriano, A. / Zhang, H. / Mayhood, T. / Hou, Y. / Mesbahi-Vasey, S. / Gu, M. / Frost, J. / Lu, J. / Johnston, J. / Hipolito, C. / Lin, S. / Painter, R.E. / Klein, D. / Walji, A. / Weinglass, A. / Kelly, T.M. / Saldanha, A. / Schubert, J. / Bernstein, H.D. / Walker, S.S.
External linksNat Commun / PubMed:40210867
MethodsX-ray diffraction
Resolution1.784 - 2.147 Å
Structure data

PDB-9cs0:
E. coli BamA beta-barrel bound to darobactin and cyclic peptide CP1
Method: X-RAY DIFFRACTION / Resolution: 1.944 Å

PDB-9cs1:
E. coli BamA beta-barrel bound to darobactin and cyclic peptide CP2
Method: X-RAY DIFFRACTION / Resolution: 2.147 Å

PDB-9cs2:
E. coli BamA beta-barrel bound to cyclic peptide CP3
Method: X-RAY DIFFRACTION / Resolution: 1.784 Å

Chemicals

ChemComp-4NE:
tetrabutylphosphonium

ChemComp-HOH:
WATER

Source
  • escherichia coli (E. coli)
  • synthetic construct (others)
  • photorhabdus khanii (bacteria)
  • escherichia coli o139:h28 (strain e24377a / etec) (bacteria)
KeywordsMEMBRANE PROTEIN / beta barrel / outer membrane protein

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