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Structure paper

TitleSnapshots of ribosome dynamics near atomic resolution in situ: a full insight into eukaryotic elongation cycle
Journal, issue, pagesto be published
Publish dateJan 12, 2024 (structure data deposition date)
AuthorsCheng J / Wu CL / Li JX / Yang Q / Zhao MJ / Zhang XZ
External linksSearch PubMed
MethodsEM (single particle)
Resolution3.2 - 4.7 Å
Structure data

EMDB-38654: State 8a (S8a) of yeast 80S ribosome bound to 3 tRNAs and eEF1A and eEF3 during mRNA decoding
Method: EM (single particle) / Resolution: 3.8 Å

EMDB-38655: State 8 (S8) of yeast 80S ribosome bound to 3 tRNAs and eEF1A during mRNA decoding
Method: EM (single particle) / Resolution: 3.5 Å

38656

8z70

EMDB-38656: State 1 (S1) of yeast 80S ribosome bound to 2 tRNAs and eEF1A during mRNA decoding
PDB-8z70: State 1 (S1) of yeast 80S ribosome bound to 2 tRNAs during mRNA decoding
Method: EM (single particle) / Resolution: 3.2 Å

38657

8z71

EMDB-38657, PDB-8z71:
State 1a (S1a) of yeast 80S ribosome bound to open eEF3 and 2 tRNAs and eEF1A during mRNA decoding
Method: EM (single particle) / Resolution: 3.6 Å

EMDB-38658: State 2a (S2a) of yeast 80S ribosome bound to 2 tRNAs during peptidyl transfer
Method: EM (single particle) / Resolution: 3.7 Å

EMDB-38659: State 2b (S2b) of yeast 80S ribosome bound to 2 tRNAs during peptidyl transfer
Method: EM (single particle) / Resolution: 3.3 Å

38660

8xu8

EMDB-38660, PDB-8xu8:
State 2c(S2c) of yeast 80S ribosome bound to compact eEF2 and 2 tRNAs during peptidyl transferation
Method: EM (single particle) / Resolution: 3.4 Å

EMDB-38661: State 2d (S2d) of yeast 80S ribosome bound to compact eEF2 and 2 tRNAs during peptidyl transfer
Method: EM (single particle) / Resolution: 3.5 Å

EMDB-38662: State 2e (S2e) of yeast 80S ribosome bound to 2 tRNAs during peptidyl transfer
Method: EM (single particle) / Resolution: 4.2 Å

EMDB-38663: State 2f (S2f) of yeast 80S ribosome bound to 2 tRNAs during peptidyl transfer
Method: EM (single particle) / Resolution: 3.9 Å

EMDB-38664: State 3 (S3) of yeast 80S ribosome bound to 2 tRNAs during translocation
Method: EM (single particle) / Resolution: 4.0 Å

EMDB-38665: State 4 (S4) of yeast 80S ribosome bound to 2 tRNAs and eEF2 during translocation
Method: EM (single particle) / Resolution: 3.7 Å

38666

8yld

EMDB-38666, PDB-8yld:
State 4a (S4a) of yeast 80S ribosome bound to 2 tRNAs and open eEF3 and eEF2 during translocation
Method: EM (single particle) / Resolution: 3.9 Å

EMDB-38667: State 5 (S5) of yeast 80S ribosome bound to 2 tRNAs and eEF2 during translocation
Method: EM (single particle) / Resolution: 3.8 Å

38668

8ylr

EMDB-38668, PDB-8ylr:
State 6 (S6) of yeast 80S ribosome bound to 2 tRNAs and eEF2 and eEF3 during tranlocation
Method: EM (single particle) / Resolution: 3.9 Å

EMDB-38669: State 7 (S7) of yeast 80S ribosome bound to 2 tRNAs and eEF2 during tranlocation
Method: EM (single particle) / Resolution: 3.7 Å

EMDB-38670: State 9 (S9) of yeast 80S ribosome bound to 2 tRNAs
Method: EM (single particle) / Resolution: 4.7 Å

EMDB-38671: State 10 (S10) of yeast 80S ribosome bound to A tRNA
Method: EM (single particle) / Resolution: 4.7 Å

Source
  • saccharomyces cerevisiae s288c (yeast)
  • oryctolagus cuniculus (rabbit)
KeywordsTRANSLATION / 80S / compact eEF2 / elongation cycle / rotated / RIBOSOME / eEF3 / eEF2

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