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Structure paper

TitleAn allosteric redox switch involved in oxygen protection in a CO 2 reductase.
Journal, issue, pagesNat. Chem. Biol., Vol. 20, Page 111-119, Year 2024
Publish dateFeb 17, 2023 (structure data deposition date)
AuthorsOliveira, A.R. / Mota, C. / Vilela-Alves, G. / Manuel, R.R. / Pedrosa, N. / Fourmond, V. / Klymanska, K. / Leger, C. / Guigliarelli, B. / Romao, M.J. / Cardoso Pereira, I.A.
External linksNat. Chem. Biol. / PubMed:37985883
MethodsX-ray diffraction
Resolution1.416 - 2.3 Å
Structure data

PDB-8cm4:
W-formate dehydrogenase C872A from Desulfovibrio vulgaris - exposed to oxygen
Method: X-RAY DIFFRACTION / Resolution: 2.3 Å

PDB-8cm5:
W-formate dehydrogenase C872A from Desulfovibrio vulgaris
Method: X-RAY DIFFRACTION / Resolution: 2.15 Å

PDB-8cm6:
W-formate dehydrogenase C872A from Desulfovibrio vulgaris - with Formamide
Method: X-RAY DIFFRACTION / Resolution: 1.416 Å

PDB-8cm7:
W-formate dehydrogenase M405A from Desulfovibrio vulgaris
Method: X-RAY DIFFRACTION / Resolution: 2.117 Å

Chemicals

ChemComp-MGD:
2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE

ChemComp-SF4:
IRON/SULFUR CLUSTER

ChemComp-GOL:
GLYCEROL

ChemComp-W:
Unknown entry

ChemComp-H2S:
HYDROSULFURIC ACID

ChemComp-NO3:
NITRATE ION

ChemComp-PEG:
DI(HYDROXYETHYL)ETHER

ChemComp-HOH:
WATER

ChemComp-CL:
Unknown entry

ChemComp-PG4:
TETRAETHYLENE GLYCOL / precipitant*YM

ChemComp-ARF:
FORMAMIDE

ChemComp-EDO:
1,2-ETHANEDIOL

Source
  • desulfovibrio vulgaris str. hildenborough (bacteria)
KeywordsOXIDOREDUCTASE / Formate / CO2 / Molybdenum and Tungsten enzymes / DMSO reductase family / ELECTRON TRANSPORT

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