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Structure paper

TitleLegionella pneumophila macrophage infectivity potentiator protein appendage domains modulate protein dynamics and inhibitor binding.
Journal, issue, pagesInt. J. Biol. Macromol., Vol. 252, Page 126366-126366, Year 2023
Publish dateNov 3, 2022 (structure data deposition date)
AuthorsWiedemann, C. / Whittaker, J.J. / Perez Carrillo, V.H. / Goretzki, B. / Dajka, M. / Tebbe, F. / Harder, J.M. / Krajczy, P.R. / Joseph, B. / Hausch, F. ...Wiedemann, C. / Whittaker, J.J. / Perez Carrillo, V.H. / Goretzki, B. / Dajka, M. / Tebbe, F. / Harder, J.M. / Krajczy, P.R. / Joseph, B. / Hausch, F. / Guskov, A. / Hellmich, U.A.
External linksInt. J. Biol. Macromol. / PubMed:37633566
MethodsX-ray diffraction
Resolution1.34 - 2.4 Å
Structure data

PDB-8bjc:
Full length structure of the apo-state LpMIP.
Method: X-RAY DIFFRACTION / Resolution: 1.71 Å

PDB-8bjd:
Full length structure of LpMIP with bound inhibitor JK095
Method: X-RAY DIFFRACTION / Resolution: 2.4 Å

PDB-8bje:
A structure of the truncated LpMIP with bound inhibitor JK236.
Method: X-RAY DIFFRACTION / Resolution: 1.49 Å

PDB-8bk4:
Full length structure of the apo-state LpMIP.
Method: X-RAY DIFFRACTION / Resolution: 1.34 Å

PDB-8bk5:
A structure of the truncated LpMIP with bound inhibitor JK095.
Method: X-RAY DIFFRACTION / Resolution: 1.44 Å

PDB-8bk6:
A truncated structure of LpMIP with bound inhibitor JK095.
Method: X-RAY DIFFRACTION / Resolution: 2.263 Å

Chemicals

ChemComp-GOL:
GLYCEROL

ChemComp-EPE:
4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID / pH buffer*YM

ChemComp-MES:
2-(N-MORPHOLINO)-ETHANESULFONIC ACID / pH buffer*YM

ChemComp-ZN:
Unknown entry

ChemComp-HOH:
WATER

ChemComp-9QN:
(1~{S},5~{S},6~{R})-10-[3,5-bis(chloranyl)phenyl]sulfonyl-5-(hydroxymethyl)-3-(pyridin-2-ylmethyl)-3,10-diazabicyclo[4.3.1]decan-2-one

ChemComp-WRL:
(1~{S},5~{S},6~{R})-10-[3,5-bis(chloranyl)phenyl]sulfonyl-5-(hydroxymethyl)-3-[(1~{S})-1-pyridin-2-ylethyl]-3,10-diazabicyclo[4.3.1]decan-2-one

ChemComp-PO4:
PHOSPHATE ION

ChemComp-NA:
Unknown entry

ChemComp-PEG:
DI(HYDROXYETHYL)ETHER

Source
  • legionella pneumophila (bacteria)
  • trypanosoma cruzi (eukaryote)
KeywordsSTRUCTURAL PROTEIN / Macrophage / potentiator / soluble / protein.

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