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TitleCrystal structures of the ligand-binding domain of human peroxisome proliferator-activated receptor delta in complexes with phenylpropanoic acid derivatives and a pyridine carboxylic acid derivative.
Journal, issue, pagesActa Crystallogr. ,Sect. F, Vol. 78, Page 81-87, Year 2022
Publish dateNov 10, 2021 (structure data deposition date)
AuthorsOyama, T. / Takiguchi, K. / Miyachi, H.
External linksActa Crystallogr. ,Sect. F / Search PubMed
MethodsX-ray diffraction
Resolution1.9 - 3 Å
Structure data

PDB-7vwe:
Human peroxisome proliferator-activated receptor (PPAR) delta ligand binding domain in complex with a synthetic partial agonist JK122
Method: X-RAY DIFFRACTION / Resolution: 3 Å

PDB-7vwf:
Human peroxisome proliferator-activated receptor (PPAR) delta ligand binding domain in complex with a synthetic agonist TIPP204
Method: X-RAY DIFFRACTION / Resolution: 1.9 Å

PDB-7vwg:
Human peroxisome proliferator-activated receptor (PPAR) delta ligand binding domain in complex with a synthetic alpha/delta dual agonist JKPL38
Method: X-RAY DIFFRACTION / Resolution: 2.2 Å

PDB-7vwh:
human peroxisome proliferator-activated receptor (PPAR) delta ligand binding domain in complex with a synthetic agonist JKPL39
Method: X-RAY DIFFRACTION / Resolution: 2.1 Å

Chemicals

ChemComp-B7G:
heptyl beta-D-glucopyranoside

ChemComp-81O:
5-[4-butoxy-3-[[[2-fluoranyl-4-(trifluoromethyl)phenyl]carbonylamino]methyl]phenyl]-4,6-dimethyl-pyridine-3-carboxylic acid

ChemComp-HOH:
WATER

ChemComp-K55:
(2S)-2-{4-butoxy-3-[({[2-fluoro-4-(trifluoromethyl)phenyl]carbonyl}amino)methyl]benzyl}butanoic acid

ChemComp-820:
(2S)-2-[[4-propoxy-3-[[[4-(trifluoromethyl)phenyl]carbonylamino]methyl]phenyl]methyl]butanoic acid

ChemComp-82K:
(2S)-2-[[4-hexoxy-3-[[[4-(trifluoromethyl)phenyl]carbonylamino]methyl]phenyl]methyl]butanoic acid

Source
  • homo sapiens (human)
KeywordsTRANSCRIPTION / NUCLEAR RECEPTOR / PROTEIN-LIGAND COMPLEX / PPAR

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