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TitleNovel and Improved Crystal Structures of H. influenzae, E. coli and P. aeruginosa Penicillin-Binding Protein 3 (PBP3) and N. gonorrhoeae PBP2: Toward a Better Understanding of beta-Lactam Target-Mediated Resistance.
Journal, issue, pagesJ. Mol. Biol., Vol. 431, Page 3501-3519, Year 2019
Publish dateOct 23, 2018 (structure data deposition date)
AuthorsBellini, D. / Koekemoer, L. / Newman, H. / Dowson, C.G.
External linksJ. Mol. Biol. / PubMed:31301409
MethodsX-ray diffraction
Resolution1.19 - 2.44 Å
Structure data

PDB-6hzj:
Apo structure of TP domain from clinical penicillin-resistant mutant Neisseria gonorrhoea strain 6140 Penicillin-Binding Protein 2 (PBP2)
Method: X-RAY DIFFRACTION / Resolution: 1.43 Å

PDB-6hzo:
Apo structure of TP domain from Haemophilus influenzae Penicillin-Binding Protein 3
Method: X-RAY DIFFRACTION / Resolution: 2.44 Å

PDB-6hzq:
Apo structure of TP domain from Escherichia coli Penicillin-Binding Protein 3
Method: X-RAY DIFFRACTION / Resolution: 1.95 Å

PDB-6hzr:
Apo structure of Pseudomonas aeruginosa Penicillin-Binding Protein 3
Method: X-RAY DIFFRACTION / Resolution: 1.19 Å

PDB-6i1e:
Crystal structure of Pseudomonas aeruginosa Penicillin-Binding Protein 3 in complex with amoxicillin
Method: X-RAY DIFFRACTION / Resolution: 1.64 Å

PDB-6i1i:
Crystal structure of TP domain from Escherichia coli penicillin-binding protein 3 in complex with penicillin
Method: X-RAY DIFFRACTION / Resolution: 1.75 Å

PDB-6r3x:
Structure of Pseudomonas aeruginosa Penicillin-Binding Protein 3 (PBP3) in complex with piperacillin
Method: X-RAY DIFFRACTION / Resolution: 1.59 Å

PDB-6r40:
Apo structure of R504C mutant of Pseudomonas aeruginosa Penicillin-Binding Protein 3 (PBP3)
Method: X-RAY DIFFRACTION / Resolution: 2.2 Å

PDB-6r42:
Structure of R504C mutant of Pseudomonas aeruginosa Penicillin-Binding Protein 3 (PBP3) in complex with piperacillin
Method: X-RAY DIFFRACTION / Resolution: 1.72 Å

Chemicals

ChemComp-HOH:
WATER

ChemComp-AXL:
2-{1-[2-AMINO-2-(4-HYDROXY-PHENYL)-ACETYLAMINO]-2-OXO-ETHYL}-5,5-DIMETHYL-THIAZOLIDINE-4-CARBOXYLIC ACID / medication, antibiotic*YM

ChemComp-JPP:
Piperacillin (Open Form)

Source
  • neisseria gonorrhoeae fa6140 (bacteria)
  • haemophilus influenzae (bacteria)
  • escherichia coli (E. coli)
  • pseudomonas aeruginosa pao1 (bacteria)
  • pseudomonas aeruginosa (bacteria)
  • escherichia coli o157:h7 (bacteria)
  • pseudomonas aeruginosa (strain atcc 15692 / dsm 22644 / cip 104116 / jcm 14847 / lmg 12228 / 1c / prs 101 / pao1) (bacteria)
KeywordsHYDROLASE / penicillin-binding protein / transpeptidase / PEPTIDE BINDING PROTEIN / peptidoglycan

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