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Structure paper

TitleMechanistic and Structural Basis for the Actions of the Antibacterial Gepotidacin against Staphylococcus aureus Gyrase.
Journal, issue, pagesAcs Infect Dis., Vol. 5, Page 570-581, Year 2019
Publish dateFeb 25, 2019 (structure data deposition date)
AuthorsGibson, E.G. / Bax, B. / Chan, P.F. / Osheroff, N.
External linksAcs Infect Dis. / PubMed:30757898
MethodsX-ray diffraction
Resolution2.31 - 2.37 Å
Structure data

PDB-6qtk:
2.31A structure of gepotidacin with S.aureus DNA gyrase and doubly nicked DNA
Method: X-RAY DIFFRACTION / Resolution: 2.31 Å

PDB-6qtp:
2.37A structure of gepotidacin with S.aureus DNA gyrase and uncleaved DNA
Method: X-RAY DIFFRACTION / Resolution: 2.37 Å

Chemicals

ChemComp-MN:
Unknown entry

ChemComp-GOL:
GLYCEROL

ChemComp-NA:
Unknown entry

ChemComp-JHN:
(3~{R})-3-[[4-(3,4-dihydro-2~{H}-pyrano[2,3-c]pyridin-6-ylmethylamino)piperidin-1-yl]methyl]-1,4,7-triazatricyclo[6.3.1.0^{4,12}]dodeca-6,8(12),9-triene-5,11-dione / medication, antibiotic, inhibitor*YM

ChemComp-HOH:
WATER

ChemComp-SO4:
SULFATE ION

Source
  • staphylococcus aureus (strain n315) (bacteria)
  • staphylococcus aureus (bacteria)
  • synthetic construct (others)
KeywordsISOMERASE / Inhibitor / DNA / Complex

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