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Structure paper

TitleInsights into the kappa / iota-carrageenan metabolism pathway of some marinePseudoalteromonasspecies.
Journal, issue, pagesCommun Biol, Vol. 2, Page 474-474, Year 2019
Publish dateJul 3, 2019 (structure data deposition date)
AuthorsHettle, A.G. / Hobbs, J.K. / Pluvinage, B. / Vickers, C. / Abe, K.T. / Salama-Alber, O. / McGuire, B.E. / Hehemann, J.H. / Hui, J.P.M. / Berrue, F. ...Hettle, A.G. / Hobbs, J.K. / Pluvinage, B. / Vickers, C. / Abe, K.T. / Salama-Alber, O. / McGuire, B.E. / Hehemann, J.H. / Hui, J.P.M. / Berrue, F. / Banskota, A. / Zhang, J. / Bottos, E.M. / Van Hamme, J. / Boraston, A.B.
External linksCommun Biol / PubMed:31886414
MethodsX-ray diffraction
Resolution1.45 - 2.5 Å
Structure data

PDB-6pnu:
Crystal structure of native DauA
Method: X-RAY DIFFRACTION / Resolution: 2.0 Å

PDB-6pop:
Crystal structure of DauA in complex with NADP+
Method: X-RAY DIFFRACTION / Resolution: 2.147 Å

PDB-6prm:
Crystal structure of apo PsS1_19B
Method: X-RAY DIFFRACTION / Resolution: 2.5 Å

PDB-6psm:
Crystal structure of PsS1_19B C77S in complex with kappa-neocarrabiose
Method: X-RAY DIFFRACTION / Resolution: 1.95 Å

PDB-6pso:
Crystal structure of PsS1_19B C77S in complex with iota-neocarratetraose
Method: X-RAY DIFFRACTION / Resolution: 2.0 Å

PDB-6pt4:
Crystal structure of apo PsS1_NC
Method: X-RAY DIFFRACTION / Resolution: 1.45 Å

PDB-6pt6:
Crystal structure of PsS1_NC C84S in complex with i-neocarratetraose
Method: X-RAY DIFFRACTION / Resolution: 2.25 Å

PDB-6pt9:
Crystal structure of PsS1_NC C84S in complex with k-neocarrabiose
Method: X-RAY DIFFRACTION / Resolution: 1.66 Å

PDB-6ptk:
Crystal structure of the sulfatase PsS1_NC C84A with bound sulfate ion
Method: X-RAY DIFFRACTION / Resolution: 1.75 Å

PDB-6ptm:
Crystal structure of apo exo-carrageenase GH42 from Bacteroides ovatus
Method: X-RAY DIFFRACTION / Resolution: 2.0 Å

Chemicals

ChemComp-EDO:
1,2-ETHANEDIOL

ChemComp-HOH:
WATER

ChemComp-NAP:
NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE

ChemComp-MG:
Unknown entry

ChemComp-CA:
Unknown entry

ChemComp-G4S:
4-O-sulfo-beta-D-galactopyranose

ChemComp-9RN:
3,6-anhydro-D-galactose

ChemComp-CL:
Unknown entry

ChemComp-ZN:
Unknown entry

ChemComp-EPE:
4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID / pH buffer*YM

ChemComp-SO4:
SULFATE ION

ChemComp-GOL:
GLYCEROL

Source
  • pseudoalteromonas fuliginea (bacteria)
  • bacteroides ovatus cl02t12c04 (bacteria)
KeywordsOXIDOREDUCTASE / Dehydrogenase / HYDROLASE / S1 sulfatase / exo-carrageenase

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