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Structure paper

TitleStructural basis of the UDP-diacylglucosamine pyrophosphohydrolase LpxH inhibition by sulfonyl piperazine antibiotics.
Journal, issue, pagesProc. Natl. Acad. Sci. USA, Vol. 117, Page 4109-4116, Year 2020
Publish dateJun 25, 2019 (structure data deposition date)
AuthorsCho, J. / Lee, M. / Cochrane, C.S. / Webster, C.G. / Fenton, B.A. / Zhao, J. / Hong, J. / Zhou, P.
External linksProc. Natl. Acad. Sci. USA / PubMed:32041866
MethodsX-ray diffraction
Resolution1.92 - 2.26 Å
Structure data

PDB-6ph9:
Crystal Structure of the Klebsiella pneumoniae LpxH-lipid X complex
Method: X-RAY DIFFRACTION / Resolution: 1.92 Å

PDB-6pib:
Structure of the Klebsiella pneumoniae LpxH-AZ1 complex
Method: X-RAY DIFFRACTION / Resolution: 2.26 Å

PDB-6pj3:
Crystal structure of the Klebsiella pneumoniae LpxH/JH-LPH-33 complex
Method: X-RAY DIFFRACTION / Resolution: 2.25 Å

Chemicals

ChemComp-MN:
Unknown entry

ChemComp-LP5:
(R)-((2R,3S,4R,5R,6R)-3-HYDROXY-2-(HYDROXYMETHYL)-5-((R)-3-HYDROXYTETRADECANAMIDO)-6-(PHOSPHONOOXY)TETRAHYDRO-2H-PYRAN-4-YL) 3-HYDROXYTETRADECANOATE

ChemComp-PG4:
TETRAETHYLENE GLYCOL / precipitant*YM

ChemComp-CA:
Unknown entry

ChemComp-EDO:
1,2-ETHANEDIOL

ChemComp-HOH:
WATER

ChemComp-OKV:
1-[5-({4-[3-(trifluoromethyl)phenyl]piperazin-1-yl}sulfonyl)-2,3-dihydro-1H-indol-1-yl]ethan-1-one

ChemComp-OKY:
1-[5-({4-[3-chloro-5-(trifluoromethyl)phenyl]piperazin-1-yl}sulfonyl)-2,3-dihydro-1H-indol-1-yl]ethan-1-one

Source
  • klebsiella pneumoniae (bacteria)
KeywordsBIOSYNTHETIC PROTEIN / lipid A / LpxH / lipid X / AZ1 / inhibitor / JH-LPH-33

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