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Structure paper

TitleElucidating the role of metal ions in carbonic anhydrase catalysis.
Journal, issue, pagesNat Commun, Vol. 11, Page 4557-4557, Year 2020
Publish dateFeb 2, 2020 (structure data deposition date)
AuthorsKim, J.K. / Lee, C. / Lim, S.W. / Adhikari, A. / Andring, J.T. / McKenna, R. / Ghim, C.M. / Kim, C.U.
External linksNat Commun / PubMed:32917908
MethodsX-ray diffraction
Resolution1.2 Å
Structure data

PDB-6luu:
apo- Carbonic Anhydrase II pH 7.8 0 atm CO2
Method: X-RAY DIFFRACTION / Resolution: 1.2 Å

PDB-6luv:
apo- Carbonic Anhydrase II pH 7.8 20 atm CO2
Method: X-RAY DIFFRACTION / Resolution: 1.2 Å

PDB-6luw:
Zn- Carbonic Anhydrase II pH 7.8 0 atm CO2
Method: X-RAY DIFFRACTION / Resolution: 1.2 Å

PDB-6lux:
Zn- Carbonic Anhydrase II pH 7.8 20 atm CO2
Method: X-RAY DIFFRACTION / Resolution: 1.2 Å

PDB-6luy:
Zn- Carbonic Anhydrase II pH 11.0 0 atm CO2
Method: X-RAY DIFFRACTION / Resolution: 1.2 Å

PDB-6luz:
Zn- Carbonic Anhydrase II pH 11.0 20 atm CO2
Method: X-RAY DIFFRACTION / Resolution: 1.2 Å

PDB-6lv1:
Co- Carbonic Anhydrase II pH 7.8 0 atm CO2
Method: X-RAY DIFFRACTION / Resolution: 1.2 Å

PDB-6lv2:
Co- Carbonic Anhydrase II pH 7.8 20 atm CO2
Method: X-RAY DIFFRACTION / Resolution: 1.2 Å

PDB-6lv3:
Co- Carbonic Anhydrase II pH 11.0 0 atm CO2
Method: X-RAY DIFFRACTION / Resolution: 1.2 Å

PDB-6lv4:
Co- Carbonic Anhydrase II pH 11.0 20 atm CO2
Method: X-RAY DIFFRACTION / Resolution: 1.2 Å

PDB-6lv5:
Ni- Carbonic Anhydrase II pH 7.8 0 atm CO2
Method: X-RAY DIFFRACTION / Resolution: 1.2 Å

PDB-6lv6:
Ni- Carbonic Anhydrase II pH 7.8 20 atm CO2
Method: X-RAY DIFFRACTION / Resolution: 1.2 Å

PDB-6lv7:
Ni- Carbonic Anhydrase II pH 11.0 0 atm CO2
Method: X-RAY DIFFRACTION / Resolution: 1.2 Å

PDB-6lv8:
Ni- Carbonic Anhydrase II pH 11.0 20 atm CO2
Method: X-RAY DIFFRACTION / Resolution: 1.2 Å

PDB-6lv9:
Cu- Carbonic Anhydrase II pH 7.8 0 atm CO2
Method: X-RAY DIFFRACTION / Resolution: 1.2 Å

PDB-6lva:
Cu- Carbonic Anhydrase II pH 7.8 20 atm CO2
Method: X-RAY DIFFRACTION / Resolution: 1.2 Å

Chemicals

ChemComp-GOL:
GLYCEROL

ChemComp-HOH:
WATER

ChemComp-CO2:
CARBON DIOXIDE

ChemComp-ZN:
Unknown entry

ChemComp-CO:
Unknown entry

ChemComp-BCT:
BICARBONATE ION / pH buffer*YM

ChemComp-NI:
NICKEL (II) ION

ChemComp-CU:
COPPER (II) ION

Source
  • homo sapiens (human)
KeywordsMETAL BINDING PROTEIN/LYASE / metalloenzymes; carbonic anhydrase; enzyme mechanism; metal coordination geometry; proton transfer; biological water dynamics / METAL BINDING PROTEIN-LYASE complex / METAL BINDING PROTEIN / LYASE

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