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Structure paper

TitleRedox Cofactor Rotates during Its Stepwise Decarboxylation: Molecular Mechanism of Conversion of Coproheme to Hemeb.
Journal, issue, pagesAcs Catalysis, Vol. 9, Page 6766-6782, Year 2019
Publish dateMar 9, 2018 (structure data deposition date)
AuthorsMilazzo, L. / Gabler, T. / Puhringer, D. / Jandova, Z. / Maresch, D. / Michlits, H. / Pfanzagl, V. / Djinovic-Carugo, K. / Oostenbrink, C. / Furtmuller, P.G. ...Milazzo, L. / Gabler, T. / Puhringer, D. / Jandova, Z. / Maresch, D. / Michlits, H. / Pfanzagl, V. / Djinovic-Carugo, K. / Oostenbrink, C. / Furtmuller, P.G. / Obinger, C. / Smulevich, G. / Hofbauer, S.
External linksAcs Catalysis / PubMed:31423350
MethodsX-ray diffraction
Resolution1.69 - 1.79 Å
Structure data

PDB-6fxj:
Structure of coproheme decarboxylase from Listeria monocytogenes in complex with iron coproporphyrin III
Method: X-RAY DIFFRACTION / Resolution: 1.79 Å

PDB-6fxq:
Structure of coproheme decarboxylase from Listeria monocytogenes during turnover
Method: X-RAY DIFFRACTION / Resolution: 1.69 Å

Chemicals

ChemComp-NA:
Unknown entry

ChemComp-FEC:
1,3,5,8-TETRAMETHYL-PORPHINE-2,4,6,7-TETRAPROPIONIC ACID FERROUS COMPLEX

ChemComp-POL:
N-PROPANOL

ChemComp-CL:
Unknown entry

ChemComp-HOH:
WATER

ChemComp-VOV:
harderoheme (III)

ChemComp-MPD:
(4S)-2-METHYL-2,4-PENTANEDIOL / precipitant*YM

Source
  • listeria monocytogenes egd-e (bacteria)
  • listeria monocytogenes serovar 1/2a (strain atcc baa-679 / egd-e) (bacteria)
KeywordsOXIDOREDUCTASE / coproheme binding / coproheme decarboxylase / pentamer / iron coproporphyrin III / monovinyl monopropionate deuteroheme

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