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Structure paper

TitleThe plant defense signal galactinol is specifically used as a nutrient by the bacterial pathogenAgrobacterium fabrum.
Journal, issue, pagesJ. Biol. Chem., Vol. 293, Page 7930-7941, Year 2018
Publish dateOct 12, 2017 (structure data deposition date)
AuthorsMeyer, T. / Vigouroux, A. / Aumont-Nicaise, M. / Comte, G. / Vial, L. / Lavire, C. / Morera, S.
External linksJ. Biol. Chem. / PubMed:29602905
MethodsX-ray diffraction
Resolution1.8 - 2.45 Å
Structure data

PDB-6epy:
Structure of the PBP MelB (Atu4661) in complex with raffinose from A.fabrum C58
Method: X-RAY DIFFRACTION / Resolution: 2.04 Å

PDB-6epz:
Structure of the periplasmic binding protein MelB (Atu4661) in complex with melibiose from Agrobacterium fabrum C58
Method: X-RAY DIFFRACTION / Resolution: 1.8 Å

PDB-6eq0:
Structure of the periplasmic binding protein (PBP) MelB (atu4661) in complex with galactose from agrobacterium tumefacien C58
Method: X-RAY DIFFRACTION / Resolution: 2.45 Å

PDB-6eq1:
Structure of the periplasmic binding protein (PBP) MelB (Atu4661) in complex with stachyose from agrobacterium fabrum C58
Method: X-RAY DIFFRACTION / Resolution: 2.1 Å

PDB-6eq8:
Structure of the periplasmic binding protein (PBP) MelB (Atu4661) in complex with galactinol from agrobacterium fabrum C58
Method: X-RAY DIFFRACTION / Resolution: 2.19 Å

Chemicals

ChemComp-EDO:
1,2-ETHANEDIOL

ChemComp-CA:
Unknown entry

ChemComp-HOH:
WATER

ChemComp-MG:
Unknown entry

ChemComp-NA:
Unknown entry

ChemComp-CL:
Unknown entry

ChemComp-PEG:
DI(HYDROXYETHYL)ETHER

ChemComp-GLA:
alpha-D-galactopyranose

ChemComp-PG4:
TETRAETHYLENE GLYCOL / precipitant*YM

ChemComp-BQZ:
galactinol

ChemComp-P4G:
1-ETHOXY-2-(2-ETHOXYETHOXY)ETHANE

Source
  • rhizobium radiobacter (bacteria)
KeywordsTRANSPORT PROTEIN / Periplasmic binding protein / protein transporter / Protein transport associated to ABC transporter / Protein transporter associated with an ABC transporter

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