Inositol trisphosphate receptors (IPRs) are ubiquitous Ca-permeable channels that mediate release of Ca from the endoplasmic reticulum, thereby regulating numerous processes including cell division, ...Inositol trisphosphate receptors (IPRs) are ubiquitous Ca-permeable channels that mediate release of Ca from the endoplasmic reticulum, thereby regulating numerous processes including cell division, cell death, differentiation and fertilization. IPRs are jointly activated by inositol trisphosphate (IP) and their permeant ion, Ca. At high concentrations, however, Ca inhibits activity, ensuring precise spatiotemporal control over intracellular Ca. Despite extensive characterization of IPR, the mechanisms through which these molecules control channel gating have remained elusive. Here, we present structures of full-length human type 3 IPRs in ligand-bound and ligand-free states. Multiple IP-bound structures demonstrate that the large cytoplasmic domain provides a platform for propagation of long-range conformational changes to the ion-conduction gate. Structures in the presence of Ca reveal two Ca-binding sites that induce the disruption of numerous interactions between subunits, thereby inhibiting IPR. These structures thus provide a mechanistic basis for beginning to understand the regulation of IPR.
EMDB-7978, PDB-6dqj: Human type 3 1,4,5-inositol trisphosphate receptor in a ligand-free state Method: EM (single particle) / Resolution: 3.49 Å
EMDB-7979: Cytoplasmic domain of human type 3 1,4,5-inositol trisphosphate receptor in a ligand-free state Method: EM (single particle) / Resolution: 3.69 Å
EMDB-7980: Human type 3 1,4,5-inositol trisphosphate receptor in a ligand-free state Method: EM (single particle) / Resolution: 3.69 Å
EMDB-7981, PDB-6dqn: Class 1 IP3-bound human type 3 1,4,5-inositol trisphosphate receptor Method: EM (single particle) / Resolution: 3.33 Å
EMDB-7982: Cytoplasmic domain of class 1 IP3-bound human type 3 1,4,5-inositol trisphosphate receptor Method: EM (single particle) / Resolution: 3.26 Å
EMDB-7984, PDB-6dqv: Class 2 IP3-bound human type 3 1,4,5-inositol trisphosphate receptor Method: EM (single particle) / Resolution: 3.82 Å
EMDB-7985: Cytoplasmic domain of class 2 IP3-bound human type 3 1,4,5-inositol trisphosphate receptor Method: EM (single particle) / Resolution: 3.94 Å
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