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Structure paper

TitleThe structure of RbmB from Streptomyces ribosidificus, an aminotransferase involved in the biosynthesis of ribostamycin.
Journal, issue, pagesProtein Sci., Vol. 26, Page 1886-1892, Year 2017
Publish dateJun 19, 2017 (structure data deposition date)
AuthorsZachman-Brockmeyer, T.R. / Thoden, J.B. / Holden, H.M.
External linksProtein Sci. / PubMed:28685903
MethodsX-ray diffraction
Resolution2.1 Å
Structure data

PDB-5w70:
X-ray Structure of RbmB from Streptomyces ribosidificus
Method: X-RAY DIFFRACTION / Resolution: 2.1 Å

PDB-5w71:
X-ray structure of BtrR from Bacillus circulans in the presence of the 2-DOS external aldimine
Method: X-RAY DIFFRACTION / Resolution: 2.1 Å

Chemicals

ChemComp-9YM:
[4-({[(1R,2S,3S,4R,5S)-5-amino-2,3,4-trihydroxycyclohexyl]amino}methyl)-5-hydroxy-6-methylpyridin-3-yl]methyl dihydrogen phosphate

ChemComp-EDO:
1,2-ETHANEDIOL

ChemComp-HOH:
WATER

ChemComp-PLP:
PYRIDOXAL-5'-PHOSPHATE

ChemComp-CL:
Unknown entry

Source
  • streptomyces ribosidificus (bacteria)
  • bacillus circulans (bacteria)
KeywordsTRANSFERASE / ribostamycin / aminotransferase / aminoglycoside / aminocyclitol antibiotic / butirosin

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