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Structure paper

TitleCombination of aptamer and drug for reversible anticoagulation in cardiopulmonary bypass.
Journal, issue, pagesNat. Biotechnol., Vol. 36, Page 606-613, Year 2018
Publish dateMay 2, 2017 (structure data deposition date)
AuthorsGunaratne, R. / Kumar, S. / Frederiksen, J.W. / Stayrook, S. / Lohrmann, J.L. / Perry, K. / Bompiani, K.M. / Chabata, C.V. / Thalji, N.K. / Ho, M.D. ...Gunaratne, R. / Kumar, S. / Frederiksen, J.W. / Stayrook, S. / Lohrmann, J.L. / Perry, K. / Bompiani, K.M. / Chabata, C.V. / Thalji, N.K. / Ho, M.D. / Arepally, G. / Camire, R.M. / Krishnaswamy, S. / Sullenger, B.A.
External linksNat. Biotechnol. / PubMed:29863725
MethodsX-ray diffraction
Resolution2 - 2.25 Å
Structure data

PDB-5voe:
DesGla-XaS195A Bound to Aptamer 11F7t
Method: X-RAY DIFFRACTION / Resolution: 2 Å

PDB-5vof:
DesGla-XaS195A Bound to Aptamer 11F7t and Rivaroxaban
Method: X-RAY DIFFRACTION / Resolution: 2.25 Å

Chemicals

ChemComp-NA:
Unknown entry

ChemComp-CA:
Unknown entry

ChemComp-MG:
Unknown entry

ChemComp-HOH:
WATER

ChemComp-RIV:
5-chloro-N-({(5S)-2-oxo-3-[4-(3-oxomorpholin-4-yl)phenyl]-1,3-oxazolidin-5-yl}methyl)thiophene-2-carboxamide / medication, anticoagulant*YM

Source
  • homo sapiens (human)
  • synthetic construct (others)
KeywordsHYDROLASE/RNA / Serine Protease / Blood Coagulation / Aptamer / Inhibitor / HYDROLASE-RNA complex / HYDROLASE/HYDROLASE INHIBITOR/RNA / HYDROLASE-HYDROLASE INHIBITOR-RNA complex

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