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Structure paper

TitlePlazomicin Retains Antibiotic Activity against Most Aminoglycoside Modifying Enzymes.
Journal, issue, pagesACS Infect Dis, Vol. 4, Page 980-987, Year 2018
Publish dateFeb 13, 2017 (structure data deposition date)
AuthorsCox, G. / Ejim, L. / Stogios, P.J. / Koteva, K. / Bordeleau, E. / Evdokimova, E. / Sieron, A.O. / Savchenko, A. / Serio, A.W. / Krause, K.M. / Wright, G.D.
External linksACS Infect Dis / PubMed:29634241
MethodsX-ray diffraction
Resolution1.53 - 2.48 Å
Structure data

PDB-5us1:
Crystal structure of aminoglycoside acetyltransferase AAC(2')-Ia in complex with N2'-acetylgentamicin C1A and coenzyme A
Method: X-RAY DIFFRACTION / Resolution: 2.48 Å

PDB-6cd7:
Crystal structure of APH(2")-IVa in complex with plazomicin
Method: X-RAY DIFFRACTION / Resolution: 1.53 Å

Chemicals

ChemComp-8MM:
(1R,2S,3S,4R,6S)-4,6-diamino-3-{[3-deoxy-4-C-methyl-3-(methylamino)-beta-L-arabinopyranosyl]oxy}-2-hydroxycyclohexyl 2-(acetylamino)-6-amino-2,3,4,6-tetradeoxy-alpha-D-erythro-hexopyranoside

ChemComp-TAR:
D(-)-TARTARIC ACID

ChemComp-ACO:
ACETYL COENZYME *A

ChemComp-GOL:
GLYCEROL

ChemComp-COA:
COENZYME A

ChemComp-HOH:
WATER

ChemComp-CL:
Unknown entry

ChemComp-EDS:
(2S)-4-amino-N-[(1R,2S,3S,4R,5S)-5-amino-4-{[(2S,3R)-3-amino-6-{[(2-hydroxyethyl)amino]methyl}-3,4-dihydro-2H-pyran-2-y / antibiotic*YM

Source
  • providencia stuartii (bacteria)
  • enterococcus casseliflavus (bacteria)
KeywordsTRANSFERASE / GNAT / GCN5-N-acetyltransferase / acetyltransferase / aminoglycoside / gentamicin / coenzyme A / acetylcoenzyme A antibiotic resistance / structural genomics / Center for Structural Genomics of Infectious Diseases / CSGID / National Institute of Allergy and Infectious Diseases / NIAID / TRANSFERASE/ANTIBIOTIC / EUKARYOTIC PROTEIN KINASE-LIKE FOLD / AMINOGLYCOSIDE PHOSPHOTRANSFERASE / KINASE / AMINOGLYCOSIDES / PLAZOMICIN / ANTIBIOTIC / TRANSFERASE-ANTIBIOTIC COMPLEX

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