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Structure paper

TitleStructural basis for enzyme bifunctionality - the case of Gan1D from Geobacillus stearothermophilus.
Journal, issue, pagesFEBS J., Vol. 284, Page 3931-3953, Year 2017
Publish dateJul 25, 2017 (structure data deposition date)
AuthorsLansky, S. / Zehavi, A. / Belrhali, H. / Shoham, Y. / Shoham, G.
External linksFEBS J. / PubMed:28975708
MethodsX-ray diffraction
Resolution1.25 - 2.15 Å
Structure data

PDB-5ok7:
Conservatively refined structure of Gan1D-E170Q, a catalytic mutant of a putative 6-phospho-beta-galactosidase from Geobacillus stearothermophilus
Method: X-RAY DIFFRACTION / Resolution: 1.34 Å

PDB-5oka:
Non-conservatively refined structure of Gan1D-E170Q, a catalytic mutant of a 6-phospho-beta-galactosidase from Geobacillus stearothermophilus
Method: X-RAY DIFFRACTION / Resolution: 1.25 Å

PDB-5okb:
High resolution structure of native Gan1D, a putative 6-phospho-beta-galactosidase from Geobacillus stearothermophilus
Method: X-RAY DIFFRACTION / Resolution: 1.331 Å

PDB-5oke:
Conservatively refined structure of Gan1D-E170Q, a catalytic mutant of a putative 6-phospho-beta-galactosidase from Geobacillus stearothermophilus, in complex with cellobiose-6-phosphate
Method: X-RAY DIFFRACTION / Resolution: 1.31 Å

PDB-5okg:
Non-conservatively refined structure of Gan1D-E170Q, a catalytic mutant of a putative 6-phospho-beta-galactosidase from Geobacillus stearothermophilus, in complex with cellobiose-6-phosphate
Method: X-RAY DIFFRACTION / Resolution: 1.25 Å

PDB-5okh:
Conservatively refined structure of Gan1D-WT, a putative 6-phospho-beta-galactosidase from Geobacillus stearothermophilus, in the C2 spacegroup
Method: X-RAY DIFFRACTION / Resolution: 1.98 Å

PDB-5okj:
Non-conservatively refined structure of Gan1D-WT, a putative 6-phospho-beta-galactosidase from Geobacillus stearothermophilus, in the C2 spacegroup
Method: X-RAY DIFFRACTION / Resolution: 1.76 Å

PDB-5okk:
Conservatively refined structure of Gan1D-WT, a putative 6-phospho-beta-galactosidase from Geobacillus stearothermophilus, in complex with 6-phospho-beta-galactose
Method: X-RAY DIFFRACTION / Resolution: 2.02 Å

PDB-5okq:
Non-conservatively refined structure of Gan1D-WT, a putative 6-phospho-beta-galactosidase from Geobacillus stearothermophilus, in complex with 6-phospho-beta-galactose
Method: X-RAY DIFFRACTION / Resolution: 1.85 Å

PDB-5okr:
Conservatively refined structure of Gan1D-WT, a putative 6-phospho-beta-galactosidase from Geobacillus stearothermophilus, in complex with 6-phospho-beta-glucose
Method: X-RAY DIFFRACTION / Resolution: 2.15 Å

PDB-5oks:
Non-conservatively refined structure of Gan1D, a 6-phospho-beta-galactosidase from Geobacillus stearothermophilus, in complex with 6-phospho-beta-glucose
Method: X-RAY DIFFRACTION / Resolution: 1.96 Å

Chemicals

ChemComp-GOL:
GLYCEROL

ChemComp-IMD:
IMIDAZOLE

ChemComp-HOH:
WATER

ChemComp-PO4:
PHOSPHATE ION

ChemComp-BG6:
6-O-phosphono-beta-D-glucopyranose

ChemComp-TRS:
2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL / pH buffer*YM

ChemComp-BGP:
6-O-phosphono-beta-D-galactopyranose

Source
  • geobacillus stearothermophilus (bacteria)
KeywordsHYDROLASE / 6-phospho-beta-galactosidase / Geobacillus stearothermophilus / Glycoside Hydrolase / GH1 family / 6-beta-phospho-galactosidase / GH1 / Gan1D / cellobiose-6-phosphate / 6-phospho-beta-galactose / 6-phospho-beta-glucose

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