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Structure paper

TitleSynthesis and in Vitro and in Vivo Evaluation of MMP-12 Selective Optical Probes.
Journal, issue, pagesBioconjug. Chem., Vol. 27, Page 2407-2417, Year 2016
Publish dateJun 2, 2016 (structure data deposition date)
AuthorsBordenave, T. / Helle, M. / Beau, F. / Georgiadis, D. / Tepshi, L. / Bernes, M. / Ye, Y. / Levenez, L. / Poquet, E. / Nozach, H. ...Bordenave, T. / Helle, M. / Beau, F. / Georgiadis, D. / Tepshi, L. / Bernes, M. / Ye, Y. / Levenez, L. / Poquet, E. / Nozach, H. / Razavian, M. / Toczek, J. / Stura, E.A. / Dive, V. / Sadeghi, M.M. / Devel, L.
External linksBioconjug. Chem. / PubMed:27564088
MethodsX-ray diffraction
Resolution1.8 - 2.07 Å
Structure data

PDB-5l79:
Crystal structure of MMP12 in complex with RXP470.1 conjugated with fluorophore Cy5,5 in space group P21212.
Method: X-RAY DIFFRACTION / Resolution: 2.07 Å

PDB-5l7f:
Crystal structure of MMP12 mutant K421A in complex with RXP470.1 conjugated with fluorophore Cy5,5 in space group P21.
Method: X-RAY DIFFRACTION / Resolution: 1.8 Å

Chemicals

ChemComp-ZN:
Unknown entry

ChemComp-CA:
Unknown entry

ChemComp-R47:
N-[(2S)-3-[(S)-(4-bromophenyl)(hydroxy)phosphoryl]-2-{[3-(3'-chlorobiphenyl-4-yl)-1,2-oxazol-5-yl]methyl}propanoyl]-L-alpha-glutamyl-L-alpha-glutamine

ChemComp-6PJ:
CY5.5-PEG2

ChemComp-EDO:
1,2-ETHANEDIOL

ChemComp-GOL:
GLYCEROL

ChemComp-HOH:
WATER

ChemComp-BR:
BROMIDE ION

ChemComp-DMS:
DIMETHYL SULFOXIDE / DMSO, precipitant*YM

Source
  • homo sapiens (human)
KeywordsHYDROLASE / Probes for optical imaging / MMP-12 / metalloprotease / inflammation / aneurysm / fluorophore / Cy5 / 5 / cyanine

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