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Structure paper

TitleDeprotonations in the Reaction of Flavin-Dependent Thymidylate Synthase.
Journal, issue, pagesBiochemistry, Vol. 55, Page 3261-3269, Year 2016
Publish dateMar 8, 2016 (structure data deposition date)
AuthorsStull, F.W. / Bernard, S.M. / Sapra, A. / Smith, J.L. / Zuiderweg, E.R. / Palfey, B.A.
External linksBiochemistry / PubMed:27214228
MethodsX-ray diffraction
Resolution1.9 - 2 Å
Structure data

PDB-5ioq:
Flavin-dependent thymidylate synthase in complex with FAD and deoxyuridine
Method: X-RAY DIFFRACTION / Resolution: 1.93 Å

PDB-5ior:
Flavin-dependent thymidylate synthase in complex with FAD and 2'-deoxyuridine-5'-monosulfate
Method: X-RAY DIFFRACTION / Resolution: 1.95 Å

PDB-5ios:
Flavin-dependent thymidylate synthase R90A variant in complex with FAD and deoxyuridine monophosphate
Method: X-RAY DIFFRACTION / Resolution: 1.9 Å

PDB-5iot:
Flavin-dependent thymidylate synthase R174A variant in complex with FAD and dUMP
Method: X-RAY DIFFRACTION / Resolution: 2 Å

Chemicals

ChemComp-FAD:
FLAVIN-ADENINE DINUCLEOTIDE / FAD*YM

ChemComp-PGE:
TRIETHYLENE GLYCOL

ChemComp-DUR:
2'-DEOXYURIDINE / antivirus*YM

ChemComp-HOH:
WATER

ChemComp-DUS:
2'-deoxy-5'-O-sulfouridine

ChemComp-RBF:
RIBOFLAVIN

ChemComp-UMP:
2'-DEOXYURIDINE 5'-MONOPHOSPHATE

Source
  • thermotoga maritima (strain atcc 43589 / msb8 / dsm 3109 / jcm 10099) (bacteria)
KeywordsTRANSFERASE / FAD-dependent / nucleotide biosynthesis / reductive methylation

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