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Structure paper

TitleOne-carbon chemistry of oxalate oxidoreductase captured by X-ray crystallography.
Journal, issue, pagesProc. Natl. Acad. Sci. USA, Vol. 113, Page 320-325, Year 2016
Publish dateNov 23, 2015 (structure data deposition date)
AuthorsGibson, M.I. / Chen, P.Y. / Johnson, A.C. / Pierce, E. / Can, M. / Ragsdale, S.W. / Drennan, C.L.
External linksProc. Natl. Acad. Sci. USA / PubMed:26712008
MethodsX-ray diffraction
Resolution1.88 - 2.5 Å
Structure data

PDB-5exd:
Crystal structure of oxalate oxidoreductase from Moorella thermoacetica bound with carboxy-di-oxido-methyl-TPP (COOM-TPP) intermediate
Method: X-RAY DIFFRACTION / Resolution: 2.5 Å

PDB-5exe:
Crystal structure of oxalate oxidoreductase from Moorella thermoacetica bound with carboxy-TPP adduct
Method: X-RAY DIFFRACTION / Resolution: 1.88 Å

Chemicals

ChemComp-SF4:
IRON/SULFUR CLUSTER

ChemComp-TPP:
THIAMINE DIPHOSPHATE

ChemComp-MG:
Unknown entry

ChemComp-O2T:
[2-[3-[(4-azanyl-2-methyl-pyrimidin-5-yl)methyl]-4-methyl-2-[1,1,2-tris(oxidanyl)-2-oxidanylidene-ethyl]-1,3-thiazol-3-ium-5-yl]ethoxy-oxidanyl-phosphoryl] hydrogen phosphate

ChemComp-HOH:
WATER

ChemComp-5SR:
[2-[3-[(4-azanyl-2-methyl-pyrimidin-5-yl)methyl]-2-carboxy-4-methyl-1,3-thiazol-3-ium-5-yl]ethoxy-oxidanyl-phosphoryl] hydrogen phosphate

ChemComp-NA:
Unknown entry

Source
  • moorella thermoacetica (strain atcc 39073) (bacteria)
KeywordsOXIDOREDUCTASE / oxalate / OFOR / thiamine

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