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Structure paper

TitleAminoglycoside binding and catalysis specificity of aminoglycoside 2-phosphotransferase IVa: A thermodynamic, structural and kinetic study.
Journal, issue, pagesBiochim. Biophys. Acta, Vol. 1860, Page 802-813, Year 2016
Publish dateJun 18, 2015 (structure data deposition date)
AuthorsKaplan, E. / Guichou, J.F. / Chaloin, L. / Kunzelmann, S. / Leban, N. / Serpersu, E.H. / Lionne, C.
External linksBiochim. Biophys. Acta / PubMed:26802312
MethodsX-ray diffraction
Resolution2.35 - 3.05 Å
Structure data

PDB-5c4k:
APH(2")-IVa in complex with GET (G418) at room temperature
Method: X-RAY DIFFRACTION / Resolution: 3.05 Å

PDB-5c4l:
Conformational alternate of sisomicin in complex with APH(2")-IVa
Method: X-RAY DIFFRACTION / Resolution: 2.35 Å

Chemicals

ChemComp-GET:
GENETICIN / antibiotic*YM

ChemComp-4XR:
(2S,3R)-3-amino-6-(aminomethyl)-3,4-dihydro-2H-pyran-2-ol

ChemComp-SIS:
(1S,2S,3R,4S,6R)-4,6-diamino-3-{[(2S,3R)-3-amino-6-(aminomethyl)-3,4-dihydro-2H-pyran-2-yl]oxy}-2-hydroxycyclohexyl 3-deoxy-4-C-methyl-3-(methylamino)-beta-L-arabinopyranoside / antibiotic*YM

ChemComp-HOH:
WATER

Source
  • enterococcus casseliflavus (bacteria)
KeywordsTRANSFERASE / Aminoglycoside phosphotransferase / antibiotic resistance

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