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Structure paper

TitleCrystal Structure of Yage, a Putative Dhdps Like Protein from Escherichia Coli K12.
Journal, issue, pagesProteins: Struct. , Funct. , Bioinf., Vol. 71, Page 2102-, Year 2008
Publish dateAug 16, 2007 (structure data deposition date)
AuthorsManicka, S. / Peleg, Y. / Unger, T. / Albeck, S. / Dym, O. / Greenblatt, H.M. / Bourenkov, G. / Lamzin, V. / Krishnaswamy, S. / Sussman, J.L.
External linksProteins: Struct. , Funct. , Bioinf. / PubMed:18361457
MethodsX-ray diffraction
Resolution1.99 - 2.2 Å
Structure data

PDB-2v8z:
Crystal Structure of YagE, a prophage protein belonging to the dihydrodipicolinic acid synthase family from E. coli K12
Method: X-RAY DIFFRACTION / Resolution: 2.2 Å

PDB-2v9d:
Crystal Structure of YagE, a prophage protein belonging to the dihydrodipicolinic acid synthase family from E. coli K12
Method: X-RAY DIFFRACTION / Resolution: 2.15 Å

PDB-4ptn:
Crystal Structure of YagE, a KDG aldolase protein in complex with Magnesium cation coordinated L-glyceraldehyde
Method: X-RAY DIFFRACTION / Resolution: 1.99 Å

Chemicals

ChemComp-HOH:
WATER

ChemComp-EDO:
1,2-ETHANEDIOL

ChemComp-GXV:
L-glyceraldehyde

ChemComp-MG:
Unknown entry

ChemComp-GOL:
GLYCEROL

ChemComp-PYR:
PYRUVIC ACID

Source
  • escherichia coli (E. coli)
KeywordsLYASE / N-ACETYL NEURAMINATE LYASE / NAL / DHDPS / DIHYDRODIPICOLINIC ACID SYNTHASE / PROPHAGE / tim barrel / NAL superfamily / Aldolase class I / Metal coordination / STEREOSPECIFICITY

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