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Structure paper

TitleDiscovery and Characterization of Gut Microbiota Decarboxylases that Can Produce the Neurotransmitter Tryptamine.
Journal, issue, pagesCell Host Microbe, Vol. 16, Page 495-503, Year 2014
Publish dateJan 7, 2014 (structure data deposition date)
AuthorsWilliams, B.B. / Van Benschoten, A.H. / Cimermancic, P. / Donia, M.S. / Zimmermann, M. / Taketani, M. / Ishihara, A. / Kashyap, P.C. / Fraser, J.S. / Fischbach, M.A.
External linksCell Host Microbe / PubMed:25263219
MethodsX-ray diffraction
Resolution2.804 - 2.84 Å
Structure data

PDB-4obu:
Ruminococcus gnavus tryptophan decarboxylase RUMGNA_01526 (apo)
Method: X-RAY DIFFRACTION / Resolution: 2.804 Å

PDB-4obv:
Ruminococcus gnavus tryptophan decarboxylase RUMGNA_01526 (alpha-FMT)
Method: X-RAY DIFFRACTION / Resolution: 2.84 Å

Chemicals

ChemComp-PLP:
PYRIDOXAL-5'-PHOSPHATE

ChemComp-HOH:
WATER

ChemComp-2SU:
alpha-(fluoromethyl)-D-tryptophan

ChemComp-3SO:
{5-hydroxy-4-[(1E)-4-(1H-indol-3-yl)-3-oxobut-1-en-1-yl]-6-methylpyridin-3-yl}methyl dihydrogen phosphate

Source
  • ruminococcus gnavus (bacteria)
KeywordsLYASE / Type 1 PLP-dependent / Decarboxylase / Tryptophan

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