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Structure paper

TitleStructure and Catalysis in the Escherichia coli Hotdog-fold Thioesterase Paralogs YdiI and YbdB.
Journal, issue, pagesBiochemistry, Vol. 53, Page 4788-4805, Year 2014
Publish dateApr 12, 2013 (structure data deposition date)
AuthorsWu, R. / Latham, J.A. / Chen, D. / Farelli, J. / Zhao, H. / Matthews, K. / Allen, K.N. / Dunaway-Mariano, D.
External linksBiochemistry / PubMed:25010423
MethodsX-ray diffraction
Resolution1.85 - 2.17 Å
Structure data

PDB-4k49:
X-ray crystal structure of E. coli YdiI complexed with 2,4-dihydroxyphenacyl CoA
Method: X-RAY DIFFRACTION / Resolution: 1.89 Å

PDB-4k4a:
X-ray crystal structure of E. coli YdiI complexed with phenacyl-CoA
Method: X-RAY DIFFRACTION / Resolution: 1.89 Å

PDB-4k4b:
X-ray crystal structure of E. coli YdiI complexed with undeca-2-one-CoA
Method: X-RAY DIFFRACTION / Resolution: 1.9 Å

PDB-4k4c:
X-ray crystal structure of E. coli YbdB complexed with phenacyl-CoA
Method: X-RAY DIFFRACTION / Resolution: 1.85 Å

PDB-4k4d:
X-ray crystal structure of E. coli YbdB complexed with 2,4-dihydroxyphenacyl-CoA
Method: X-RAY DIFFRACTION / Resolution: 2.17 Å

Chemicals

ChemComp-HFQ:
2,4-dihydroxyphenacyl coenzyme A

ChemComp-HOH:
WATER

ChemComp-0FQ:
phenacyl coenzyme A

ChemComp-UOQ:
undeca-2-one coenzyme A

ChemComp-CL:
Unknown entry

ChemComp-MLI:
MALONATE ION

ChemComp-ACT:
ACETATE ION

Source
  • escherichia coli (E. coli)
KeywordsHYDROLASE / Hot-dog fold / thioesterase / Hotdog fold / thioeatsrase

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