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Structure paper

TitleCrystal Structures of Bovine CD1d Reveal Altered αGalCer Presentation and a Restricted A' Pocket Unable to Bind Long-Chain Glycolipids.
Journal, issue, pagesPlos One, Vol. 7, Page e47989-e47989, Year 2012
Publish dateMay 15, 2012 (structure data deposition date)
AuthorsWang, J. / Guillaume, J. / Pauwels, N. / Van Calenbergh, S. / Van Rhijn, I. / Zajonc, D.M.
External linksPlos One / PubMed:23110152
MethodsX-ray diffraction
Resolution2.4 - 2.864 Å
Structure data

PDB-4f7c:
Crystal structure of bovine CD1d with bound C12-di-sulfatide
Method: X-RAY DIFFRACTION / Resolution: 2.864 Å

PDB-4f7e:
Crystal structure of bovine CD1d with bound C16:0-alpha-galactosyl ceramide
Method: X-RAY DIFFRACTION / Resolution: 2.4 Å

Chemicals

ChemComp-0SG:
N-{(2S,3R,4E)-1-[(3,6-di-O-sulfo-beta-D-galactopyranosyl)oxy]-3-hydroxyoctadec-4-en-2-yl}dodecanamide

ChemComp-HOH:
WATER

ChemComp-0SH:
N-[(2S,3S,4R)-1-(alpha-D-galactopyranosyloxy)-3,4-dihydroxyoctadecan-2-yl]hexadecanamide

ChemComp-NAG:
2-acetamido-2-deoxy-beta-D-glucopyranose

ChemComp-SO4:
SULFATE ION

Source
  • bos taurus (domestic cattle)
KeywordsIMMUNE SYSTEM / protein-glycolipid complex / MHC-fold / Ig-fold / antigen presentation / TCR / membrane

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