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Structure paper

TitleBiochemical and structural characterization of the glycosylase domain of MBD4 bound to thymine and 5-hydroxymethyuracil-containing DNA.
Journal, issue, pagesNucleic Acids Res., Vol. 40, Page 9917-9926, Year 2012
Publish dateMar 21, 2012 (structure data deposition date)
AuthorsMorera, S. / Grin, I. / Vigouroux, A. / Couve, S. / Henriot, V. / Saparbaev, M. / Ishchenko, A.A.
External linksNucleic Acids Res. / PubMed:22848106
MethodsX-ray diffraction
Resolution1.79 - 3 Å
Structure data

PDB-4e9e:
Structure of the glycosylase domain of MBD4
Method: X-RAY DIFFRACTION / Resolution: 1.9 Å

PDB-4e9f:
Structure of the glycosylase domain of MBD4 bound to AP site containing DNA
Method: X-RAY DIFFRACTION / Resolution: 1.79 Å

PDB-4e9g:
structure of the glycosylase domain of MBD4 bound to thymine containing DNA
Method: X-RAY DIFFRACTION / Resolution: 2.35 Å

PDB-4e9h:
structure of glycosylase domain of MBD4 bound to 5hmU containing DNA
Method: X-RAY DIFFRACTION / Resolution: 3 Å

PDB-4ea4:
Structure of the glycosylase domain of MBD4 bound to 5hmU-containing DNA
Method: X-RAY DIFFRACTION / Resolution: 2 Å

PDB-4ea5:
Structure of the glycoslyase domain of MBD4 bound to a 5hmU containing DNA
Method: X-RAY DIFFRACTION / Resolution: 2.14 Å

Chemicals

ChemComp-HOH:
WATER

ChemComp-EDO:
1,2-ETHANEDIOL

Source
  • homo sapiens (human)
  • synthetic (others)
KeywordsHYDROLASE / HhH DNA glycosylase superfamily / HYDROLASE/DNA / HhH DNA glycosylase family / HYDROLASE-DNA complex

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