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Structure paper

TitleBroad-Spectrum Antivirals against 3C or 3C-Like Proteases of Picornaviruses, Noroviruses, and Coronaviruses.
Journal, issue, pagesJ. Virol., Vol. 86, Page 11754-11762, Year 2012
Publish dateNov 21, 2011 (structure data deposition date)
AuthorsKim, Y. / Lovell, S. / Tiew, K.C. / Mandadapu, S.R. / Alliston, K.R. / Battaile, K.P. / Groutas, W.C. / Chang, K.O.
External linksJ. Virol. / PubMed:22915796
MethodsX-ray diffraction
Resolution1.5 - 2.25 Å
Structure data

PDB-3ur6:
1.5A resolution structure of apo Norwalk Virus Protease
Method: X-RAY DIFFRACTION / Resolution: 1.5 Å

PDB-3ur9:
1.65A resolution structure of Norwalk Virus Protease Containing a covalently bound dipeptidyl inhibitor
Method: X-RAY DIFFRACTION / Resolution: 1.65 Å

PDB-4dcd:
1.6A resolution structure of PolioVirus 3C Protease Containing a covalently bound dipeptidyl inhibitor
Method: X-RAY DIFFRACTION / Resolution: 1.69 Å

PDB-4f49:
2.25A resolution structure of Transmissible Gastroenteritis Virus Protease containing a covalently bound Dipeptidyl Inhibitor
Method: X-RAY DIFFRACTION / Resolution: 2.25 Å

Chemicals

ChemComp-HOH:
WATER

ChemComp-CL:
Unknown entry

ChemComp-K36:
(1S,2S)-2-({N-[(benzyloxy)carbonyl]-L-leucyl}amino)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propane-1-sulfonic acid

ChemComp-DTT:
2,3-DIHYDROXY-1,4-DITHIOBUTANE

ChemComp-SO4:
SULFATE ION

ChemComp-PG4:
TETRAETHYLENE GLYCOL / precipitant*YM

Source
  • norovirus
  • human poliovirus 1
  • porcine transmissible gastroenteritis coronavirus
KeywordsHYDROLASE / PROTEASE / NOROVIRUS / NORWALK VIRUS / ANTIVIRAL INHIBITORS / DIPEPTIDYL INHIBITOR / HYDROLASE/HYDROLASE INHIBITOR / HYDROLASE-HYDROLASE INHIBITOR complex / POLIOVIRUS

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