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Structure paper

TitleStructure-based design and evaluation of naphthalene diimide g-quadruplex ligands as telomere targeting agents in pancreatic cancer cells.
Journal, issue, pagesJ. Med. Chem., Vol. 56, Page 2959-2974, Year 2013
Publish dateDec 6, 2011 (structure data deposition date)
AuthorsMicco, M. / Collie, G.W. / Dale, A.G. / Ohnmacht, S.A. / Pazitna, I. / Gunaratnam, M. / Reszka, A.P. / Neidle, S.
External linksJ. Med. Chem. / PubMed:23514618
MethodsX-ray diffraction
Resolution1.95 - 2.754 Å
Structure data

PDB-3uyh:
Crystal structure of an intramolecular human telomeric DNA G-quadruplex bound by the naphthalene diimide compound, MM41
Method: X-RAY DIFFRACTION / Resolution: 1.95 Å

PDB-4da3:
Crystal structure of an intramolecular human telomeric DNA G-quadruplex 21-mer bound by the naphthalene diimide compound MM41.
Method: X-RAY DIFFRACTION / Resolution: 2.4 Å

PDB-4daq:
Crystal structure of an intramolecular human telomeric DNA G-quadruplex 21-mer bound by the naphthalene diimide compound BMSG-SH-3
Method: X-RAY DIFFRACTION / Resolution: 2.754 Å

Chemicals

ChemComp-K:
Unknown entry

ChemComp-0DX:
4,9-bis{[3-(4-methylpiperazin-1-yl)propyl]amino}-2,7-bis[3-(morpholin-4-yl)propyl]benzo[lmn][3,8]phenanthroline-1,3,6,8(2H,7H)-tetrone

ChemComp-HOH:
WATER

ChemComp-R8G:
2,7-bis[3-(4-methylpiperazin-1-yl)propyl]-4,9-bis{[3-(4-methylpiperazin-1-yl)propyl]amino}benzo[lmn][3,8]phenanthroline-1,3,6,8(2H,7H)-tetrone

Source
  • synthetic dna (others)
KeywordsDNA / intramolecular / ligand-complex / G-quadruplex / telomere

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