Database of articles cited by EMDB/PDB/SASBDB data

Keywords
Structure methods	All X-ray diffraction NMR electron microscopy small angle scattering neutron diffraction fiber diffraction powder diffraction infrared spectroscopy EPR fluorescence transfer theoretical model Hybrid
Author
Journal
IF	>30 >20 >10 >5 all

Title	The O-Carbamoyltransferase TobZ Catalyzes an Ancient Enzymatic Reaction.
Journal, issue, pages	Angew. Chem. Int. Ed. Engl., Vol. 51, Page 4046-4052, Year 2012
Publish date	Jan 9, 2012 (structure data deposition date)
Authors	Parthier, C. / Gorlich, S. / Jaenecke, F. / Breithaupt, C. / Brauer, U. / Fandrich, U. / Clausnitzer, D. / Wehmeier, U.F. / Bottcher, C. / Scheel, D. / Stubbs, M.T.
External links	Angew. Chem. Int. Ed. Engl. / PubMed:22383337
Methods	X-ray diffraction
Resolution	1.57 - 2.9 Å
Structure data	PDB-3ven: Crystal structure of the O-carbamoyltransferase TobZ Method: X-RAY DIFFRACTION / Resolution: 1.57 Å PDB-3veo: Crystal structure of the O-carbamoyltransferase TobZ in complex with carbamoyl phosphate Method: X-RAY DIFFRACTION / Resolution: 2.187 Å PDB-3ver: Crystal structure of the O-carbamoyltransferase TobZ in complex with carbamoyl adenylate intermediate Method: X-RAY DIFFRACTION / Resolution: 2.34 Å PDB-3ves: Crystal structure of the O-carbamoyltransferase TobZ in complex with AMPCPP and carbamoyl phosphate Method: X-RAY DIFFRACTION / Resolution: 2.23 Å PDB-3vet: Crystal structure of the O-carbamoyltransferase TobZ in complex with Tobramycin, carbamoyl phosphate and ADP Method: X-RAY DIFFRACTION / Resolution: 2.2 Å PDB-3vew: Crystal structure of the O-carbamoyltransferase TobZ in complex with ADP Method: X-RAY DIFFRACTION / Resolution: 2.352 Å PDB-3vex: Crystal structure of the O-carbamoyltransferase TobZ H14N variant in complex with carbamoyl adenylate intermediate Method: X-RAY DIFFRACTION / Resolution: 1.9 Å PDB-3vez: Crystal structure of the O-carbamoyltransferase TobZ K443A variant in complex with ATP, ADP and carbamoyl phosphate Method: X-RAY DIFFRACTION / Resolution: 2.4 Å PDB-3vf2: Crystal structure of the O-carbamoyltransferase TobZ M473I variant in complex with carbamoyl phosphate and ADP Method: X-RAY DIFFRACTION / Resolution: 2.9 Å PDB-3vf4: Crystal structure of the O-carbamoyltransferase TobZ S530A variant in complex with carbamoyl phosphate and ADP Method: X-RAY DIFFRACTION / Resolution: 2.4 Å PDB-4e1b: Re-refinement of PDB entry 2EQA - SUA5 protein from Sulfolobus tokodaii with bound threonylcarbamoyladenylate Method: X-RAY DIFFRACTION / Resolution: 1.8 Å
Chemicals	ChemComp-K: Unknown entry ChemComp-FE2: Unknown entry ChemComp-GOL: GLYCEROL ChemComp-TLA: L(+)-TARTARIC ACID ChemComp-HOH: WATER ChemComp-CP: PHOSPHORIC ACID MONO(FORMAMIDE)ESTER ChemComp-EDO: 1,2-ETHANEDIOL ChemComp-NA: Unknown entry ChemComp-CA0: 5'-O-[(S)-(carbamoyloxy)(hydroxy)phosphoryl]adenosine ChemComp-APC: DIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER / AMP-CPP, energy-carrying molecule analogueYM ChemComp-MN: Unknown entry ChemComp-ADP: ADENOSINE-5'-DIPHOSPHATE / ADP, energy-carrying moleculeYM ChemComp-TOY: TOBRAMYCIN / antibioticYM ChemComp-SO4: SULFATE ION ChemComp-MG: Unknown entry ChemComp-ATP: ADENOSINE-5'-TRIPHOSPHATE / ATP, energy-carrying moleculeYM ChemComp-TXA: threonylcarbamoyladenylate
Source	streptoalloteichus tenebrarius (bacteria) sulfolobus tokodaii (archaea)
Keywords	TRANSFERASE / antibiotic biosynthesis / substrate assisted catalysis / substrate channeling / adenylation / structural enzymology / enzyme evolution / TRANSFERASE/ANTIBIOTIC / TRANSFERASE-ANTIBIOTIC complex / RNA BINDING PROTEIN / YRDC/RIBB fold / YRDC domain / SUA5 domain / tRNA modification T6A