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Structure paper

TitleA variable light domain fluorogen activating protein homodimerizes to activate dimethylindole red.
Journal, issue, pagesBiochemistry, Vol. 51, Page 2471-2485, Year 2012
Publish dateJul 20, 2011 (structure data deposition date)
AuthorsSenutovitch, N. / Stanfield, R.L. / Bhattacharyya, S. / Rule, G.S. / Wilson, I.A. / Armitage, B.A. / Waggoner, A.S. / Berget, P.B.
External linksBiochemistry / PubMed:22390683
MethodsX-ray diffraction
Resolution1.451 - 1.96 Å
Structure data

PDB-3t0v:
Unliganded fluorogen activating protein M8VL
Method: X-RAY DIFFRACTION / Resolution: 1.451 Å

PDB-3t0w:
Fluorogen activating protein M8VL in complex with dimethylindole red
Method: X-RAY DIFFRACTION / Resolution: 1.501 Å

PDB-3t0x:
Fluorogen Activating Protein M8VLA4(S55P) in complex with dimethylindole red
Method: X-RAY DIFFRACTION / Resolution: 1.96 Å

Chemicals

ChemComp-1PE:
PENTAETHYLENE GLYCOL / precipitant*YM

ChemComp-PE3:
3,6,9,12,15,18,21,24,27,30,33,36,39-TRIDECAOXAHENTETRACONTANE-1,41-DIOL

ChemComp-EDO:
1,2-ETHANEDIOL

ChemComp-SO4:
SULFATE ION

ChemComp-TRS:
2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL / pH buffer*YM

ChemComp-HOH:
WATER

ChemComp-CL:
Unknown entry

ChemComp-DIW:
1-(3-sulfopropyl)-4-[(1E,3E)-3-(1,3,3-trimethyl-1,3-dihydro-2H-indol-2-ylidene)prop-1-en-1-yl]quinolinium

Source
  • homo sapiens (human)
KeywordsDYE-BINDING PROTEIN / immunoglobulin fold / fluorogen activation / dimethylindole red

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