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Structure paper

TitleStructure-activity characterization of sulfide:quinone oxidoreductase variants.
Journal, issue, pagesJ. Struct. Biol., Vol. 178, Page 319-328, Year 2012
Publish dateJul 14, 2011 (structure data deposition date)
AuthorsCherney, M.M. / Zhang, Y. / James, M.N. / Weiner, J.H.
External linksJ. Struct. Biol. / PubMed:22542586
MethodsX-ray diffraction
Resolution1.7955 - 2.5001 Å
Structure data

PDB-3sx6:
Crystal structure of sulfide:quinone oxidoreductase Cys356Ala variant from Acidithiobacillus ferrooxidans complexed with decylubiquinone
Method: X-RAY DIFFRACTION / Resolution: 1.7955 Å

PDB-3sxi:
Crystal structure of sulfide:quinone oxidoreductase Cys128Ala variant from Acidithiobacillus ferrooxidans complexed with decylubiquinone
Method: X-RAY DIFFRACTION / Resolution: 2.1792 Å

PDB-3sy4:
Crystal structure of sulfide:quinone oxidoreductase Ser126Ala variant from Acidithiobacillus ferrooxidans
Method: X-RAY DIFFRACTION / Resolution: 1.91 Å

PDB-3syi:
Crystal structure of sulfide:quinone oxidoreductase Ser126Ala variant from Acidithiobacillus ferrooxidans using 7.0 keV diffraction data
Method: X-RAY DIFFRACTION / Resolution: 2.2001 Å

PDB-3sz0:
Crystal structure of sulfide:quinone oxidoreductase from Acidithiobacillus ferrooxidans in complex with sodium selenide
Method: X-RAY DIFFRACTION / Resolution: 2.1501 Å

PDB-3szc:
Crystal structure of sulfide:quinone oxidoreductase from Acidithiobacillus ferrooxidans in complex with gold (I) cyanide
Method: X-RAY DIFFRACTION / Resolution: 2.2 Å

PDB-3szf:
Crystal structure of sulfide:quinone oxidoreductase H198A variant from Acidithiobacillus ferrooxidans in complex with bound trisulfide and decylubiquinone
Method: X-RAY DIFFRACTION / Resolution: 2.0994 Å

PDB-3szw:
Crystal structure of sulfide:quinone oxidoreductase Cys128Ser variant from Acidithiobacillus ferrooxidans in complex with decylubiquinone
Method: X-RAY DIFFRACTION / Resolution: 2.2 Å

PDB-3t0k:
Crystal structure of sulfide:quinone oxidoreductase from Acidithiobacillus ferrooxidans with bound trisulfide and decylubiquinone
Method: X-RAY DIFFRACTION / Resolution: 2 Å

PDB-3t14:
Crystal structure of sulfide:quinone oxidoreductase Cys128Ala variant from Acidithiobacillus ferrooxidans with bound disulfide
Method: X-RAY DIFFRACTION / Resolution: 2.21 Å

PDB-3t2k:
Crystal structure of sulfide:quinone oxidoreductase Cys128Ala variant from Acidithiobacillus ferrooxidans with bound trisulfane
Method: X-RAY DIFFRACTION / Resolution: 2.3501 Å

PDB-3t2y:
Crystal structure of sulfide:quinone oxidoreductase His132Ala variant from Acidithiobacillus ferrooxidans with bound disulfide
Method: X-RAY DIFFRACTION / Resolution: 2.5001 Å

Chemicals

ChemComp-FAD:
FLAVIN-ADENINE DINUCLEOTIDE / FAD*YM

ChemComp-LMT:
DODECYL-BETA-D-MALTOSIDE / detergent*YM

ChemComp-DCQ:
2-decyl-5,6-dimethoxy-3-methylcyclohexa-2,5-diene-1,4-dione

ChemComp-SO4:
SULFATE ION

ChemComp-H2S:
HYDROSULFURIC ACID

ChemComp-HOH:
WATER

ChemComp-6SE:
triselane

ChemComp-SE:
SELENIUM ATOM

ChemComp-AU:
Unknown entry

ChemComp-S3H:
trisulfane

ChemComp-S2H:
Hydrogen disulfide

Source
  • acidithiobacillus ferrooxidans atcc 23270 (bacteria)
  • acidithiobacillus ferrooxidans (bacteria)
KeywordsOXIDOREDUCTASE / sulfide:quinone oxidoreductase / Cys356Ala variant / integral monotopic membrane protein / complex with sulfide and decylubiquinone / Cys128Ala variant / complex with sulfide / Ser126Ala variant / complex with selenide / complex with gold (I) cyanide / His198Ala variant / complex with tetrasulfide and ubiquinone / Cys128Ser variant / complex with decylubiquinone / complex with tetrasulfur and decylubiquinone / complex with disulfide / complex with trisulfane / His132Ala variant

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