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Structure paper

TitleEmergent Decarboxylase Activity and Attenuation of alpha/beta-Hydrolase Activity during the Evolution of Methylketone Biosynthesis in Tomato.
Journal, issue, pagesPlant Cell, Vol. 24, Page 1596-1607, Year 2012
Publish dateJul 11, 2011 (structure data deposition date)
AuthorsAuldridge, M.E. / Guo, Y. / Austin, M.B. / Ramsey, J. / Fridman, E. / Pichersky, E. / Noel, J.P.
External linksPlant Cell / PubMed:22523203
MethodsX-ray diffraction
Resolution1.7 - 2.31 Å
Structure data

PDB-3stt:
Crystal Structure of tomato Methylketone Synthase I Apo form
Method: X-RAY DIFFRACTION / Resolution: 2.24 Å

PDB-3stu:
Crystal Structure of tomato Methylketone Synthase I complexed with methyl-3-hydroxydodecanoate
Method: X-RAY DIFFRACTION / Resolution: 1.93 Å

PDB-3stv:
Crystal Structure of tomato Methylketone Synthase I complexed with 3-hydroxyoctanoate
Method: X-RAY DIFFRACTION / Resolution: 2.2 Å

PDB-3stw:
Crystal Structure of tomato Methylketone Synthase I complexed with 2-tridecanone
Method: X-RAY DIFFRACTION / Resolution: 2.31 Å

PDB-3stx:
Crystal Structure of tomato Methylketone Synthase I H243A variant complexed with beta-ketoheptanoate
Method: X-RAY DIFFRACTION / Resolution: 2.3 Å

PDB-3sty:
Crystal Structure of tomato Methylketone Synthase I T18A mutant
Method: X-RAY DIFFRACTION / Resolution: 1.7 Å

Chemicals

ChemComp-DKA:
DECANOIC ACID

ChemComp-HOH:
WATER

ChemComp-DK3:
methyl (3S)-3-hydroxydodecanoate

ChemComp-3HO:
(3S)-3-hydroxyoctanoic acid

ChemComp-BR:
BROMIDE ION

ChemComp-2TD:
tridec-12-en-2-one

ChemComp-BKA:
3-oxoheptanoic acid

Source
  • lycopersicon hirsutum f. glabratum (plant)
KeywordsHYDROLASE / methylketone / alpha/beta hydrolase / decarboxylase

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