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Structure paper

TitleCrystal structures of covalent complexes of beta-lactam antibiotics with Escherichia coli penicillin-binding protein 5: toward an understanding of antibiotic specificity
Journal, issue, pagesBiochemistry, Vol. 49, Page 8094-8104, Year 2010
Publish dateMay 12, 2010 (structure data deposition date)
AuthorsNicola, G. / Tomberg, J. / Pratt, R.F. / Nicholas, R.A. / Davies, C.
External linksBiochemistry / PubMed:20726582
MethodsX-ray diffraction
Resolution1.5 - 2.1 Å
Structure data

PDB-3mzd:
Structure of penicillin-binding protein 5 from E. coli: cloxacillin acyl-enzyme complex
Method: X-RAY DIFFRACTION / Resolution: 1.9 Å

PDB-3mze:
Structure of penicillin-binding protein 5 from E.coli: cefoxitin acyl-enzyme complex
Method: X-RAY DIFFRACTION / Resolution: 2.1 Å

PDB-3mzf:
Structure of penicillin-binding protein 5 from E. coli: imipenem acyl-enzyme complex
Method: X-RAY DIFFRACTION / Resolution: 1.5 Å

Chemicals

ChemComp-CXV:
(2R,4S)-2-[(1S)-1-({[3-(2-chlorophenyl)-5-methyl-1,2-oxazol-4-yl]carbonyl}amino)-2-oxoethyl]-5,5-dimethyl-1,3-thiazolid

ChemComp-GOL:
GLYCEROL

ChemComp-HOH:
WATER

ChemComp-1QL:
(2R)-5-[(carbamoyloxy)methyl]-2-{(1S)-1-methoxy-2-oxo-1-[(thiophen-2-ylacetyl)amino]ethyl}-3,6-dihydro-2H-1,3-thiazine-4-carboxylic acid / antibiotic*YM

ChemComp-IM2:
(5R)-5-[(1S,2R)-1-formyl-2-hydroxypropyl]-3-[(2-{[(E)-iminomethyl]amino}ethyl)sulfanyl]-4,5-dihydro-1H-pyrrole-2-carbox / antibiotic*YM

Source
  • escherichia coli (E. coli)
KeywordsHYDROLASE/ANTIBIOTIC / BETA-LACTAM ANTIBIOTIC / PENICILLIN-BINDING PROTEIN / DD-CARBOXYPEPTIDASE / HYDROLASE / HYDROLASE-ANTIBIOTIC complex

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