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Structure paper

TitleThe structure of Aquifex aeolicus sulfide:quinone oxidoreductase, a basis to understand sulfide detoxification and respiration
Journal, issue, pagesProc. Natl. Acad. Sci. USA, Vol. 106, Page 9625-9630, Year 2009
Publish dateJun 23, 2009 (structure data deposition date)
AuthorsMarcia, M. / Ermler, U. / Peng, G.H. / Michel, H.
External linksProc. Natl. Acad. Sci. USA / PubMed:19487671
MethodsX-ray diffraction
Resolution2 - 2.9 Å
Structure data

PDB-3hyv:
3-D X-Ray structure of the sulfide:quinone oxidoreductase from the hyperthermophilic bacterium Aquifex aeolicus
Method: X-RAY DIFFRACTION / Resolution: 2.3 Å

PDB-3hyw:
3-D X-Ray structure of the sulfide:quinone oxidoreductase of the hyperthermophilic bacterium Aquifex aeolicus in complex with decylubiquinone
Method: X-RAY DIFFRACTION / Resolution: 2 Å

PDB-3hyx:
3-D X-Ray structure of the sulfide:quinone oxidoreductase from Aquifex aeolicus in complex with Aurachin C
Method: X-RAY DIFFRACTION / Resolution: 2.9 Å

Chemicals

ChemComp-FAD:
FLAVIN-ADENINE DINUCLEOTIDE / FAD*YM

ChemComp-LMT:
DODECYL-BETA-D-MALTOSIDE / detergent*YM

ChemComp-H2S:
HYDROSULFURIC ACID

ChemComp-PS9:
octathiocane

ChemComp-MES:
2-(N-MORPHOLINO)-ETHANESULFONIC ACID / pH buffer*YM

ChemComp-SO4:
SULFATE ION

ChemComp-HOH:
WATER

ChemComp-DCQ:
2-decyl-5,6-dimethoxy-3-methylcyclohexa-2,5-diene-1,4-dione

ChemComp-AUK:
1-hydroxy-2-methyl-3-[(2E,6E)-3,7,11-trimethyldodeca-2,6,10-trien-1-yl]quinolin-4(1H)-one

Source
  • aquifex aeolicus (bacteria)
KeywordsOXIDOREDUCTASE / PROTEIN COMPLEX / MONOTOPIC MEMBRANE PROTEIN / FLAVOPROTEIN / ROSSMANN-FOLD DOMAIN / POLYSULFUR / SULFIDE OXIDATION / QUINONE REDUCTION

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