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TitleDetection and time course of formation of major thiamin diphosphate-bound covalent intermediates derived from a chromophoric substrate analogue on benzoylformate decarboxylase.
Journal, issue, pagesBiochemistry, Vol. 48, Page 981-994, Year 2009
Publish dateNov 5, 2008 (structure data deposition date)
AuthorsChakraborty, S. / Nemeria, N.S. / Balakrishnan, A. / Brandt, G.S. / Kneen, M.M. / Yep, A. / McLeish, M.J. / Kenyon, G.L. / Petsko, G.A. / Ringe, D. / Jordan, F.
External linksBiochemistry / PubMed:19140682
MethodsX-ray diffraction
Resolution1.34 Å
Structure data

PDB-3f6b:
Crystal structure of benzoylformate decarboxylase in complex with the pyridyl inhibitor PAA
Method: X-RAY DIFFRACTION / Resolution: 1.34 Å

PDB-3f6e:
Crystal structure of benzoylformate decarboxylase in complex with the pyridyl inhibitor 3-PKB
Method: X-RAY DIFFRACTION / Resolution: 1.34 Å

Chemicals

ChemComp-MG:
Unknown entry

ChemComp-8PA:
3-[(4-amino-2-methylpyrimidin-5-yl)methyl]-5-(2-{[(S)-hydroxy(phosphonooxy)phosphoryl]oxy}ethyl)-2-[(1S,2E)-1-hydroxy-3-pyridin-3-ylprop-2-en-1-yl]-4-methyl-1,3-thiazol-3-ium

ChemComp-HOH:
WATER

Source
  • pseudomonas putida (bacteria)
KeywordsLYASE / thiamin adduct / Aromatic hydrocarbons catabolism / Calcium / Decarboxylase / Magnesium / Mandelate pathway / Metal-binding / Thiamine pyrophosphate

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