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Structure paper

TitleComparative Structural Analysis of Human DEAD-Box RNA Helicases.
Journal, issue, pagesPlos One, Vol. 5, Page 12791-12791, Year 2010
Publish dateMar 7, 2006 (structure data deposition date)
AuthorsSchutz, P. / Karlberg, T. / van den Berg, S. / Collins, R. / Lehtio, L. / Hogbom, M. / Holmberg-Schiavone, L. / Tempel, W. / Park, H.W. / Hammarstrom, M. ...Schutz, P. / Karlberg, T. / van den Berg, S. / Collins, R. / Lehtio, L. / Hogbom, M. / Holmberg-Schiavone, L. / Tempel, W. / Park, H.W. / Hammarstrom, M. / Moche, M. / Thorsell, A.G. / Schuler, H.
External linksPlos One / PubMed:20941364
MethodsX-ray diffraction
Resolution1.4 - 2.8 Å
Structure data

PDB-2g9n:
Structure of the DEAD domain of Human eukaryotic initiation factor 4A, eIF4A
Method: X-RAY DIFFRACTION / Resolution: 2.25 Å

PDB-2p6n:
Human DEAD-box RNA helicase DDX41, helicase domain
Method: X-RAY DIFFRACTION / Resolution: 2.6 Å

PDB-2pl3:
Human DEAD-box RNA helicase DDX10, DEAD domain in complex with ADP
Method: X-RAY DIFFRACTION / Resolution: 2.15 Å

PDB-2rb4:
Crystal structure of the Helicase domain of human DDX25 RNA helicase
Method: X-RAY DIFFRACTION / Resolution: 2.8 Å

PDB-3b7g:
Human DEAD-box RNA helicase DDX20, Conserved domain I (DEAD) in complex with AMPPNP (Adenosine-(Beta,gamma)-imidotriphosphate)
Method: X-RAY DIFFRACTION / Resolution: 1.9 Å

PDB-3ber:
Human DEAD-box RNA-helicase DDX47, conserved domain I in complex with AMP
Method: X-RAY DIFFRACTION / Resolution: 1.4 Å

PDB-3bor:
Crystal structure of the DEADc domain of human translation initiation factor 4A-2
Method: X-RAY DIFFRACTION / Resolution: 1.85 Å

PDB-3dkp:
Human DEAD-box RNA-helicase DDX52, conserved domain I in complex with ADP
Method: X-RAY DIFFRACTION / Resolution: 2.1 Å

PDB-3fe2:
Human DEAD-BOX RNA helicase DDX5 (P68), conserved domain I in complex with ADP
Method: X-RAY DIFFRACTION / Resolution: 2.6 Å

PDB-3iuy:
Crystal structure of DDX53 DEAD-box domain
Method: X-RAY DIFFRACTION / Resolution: 2.4 Å

PDB-3ly5:
DDX18 dead-domain
Method: X-RAY DIFFRACTION / Resolution: 2.8 Å

Chemicals

ChemComp-HOH:
WATER

ChemComp-MG:
Unknown entry

ChemComp-ADP:
ADENOSINE-5'-DIPHOSPHATE / ADP, energy-carrying molecule*YM

ChemComp-EOH:
ETHANOL

ChemComp-CL:
Unknown entry

ChemComp-SO4:
SULFATE ION

ChemComp-ZN:
Unknown entry

ChemComp-ANP:
PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER / AMP-PNP, energy-carrying molecule analogue*YM

ChemComp-PO4:
PHOSPHATE ION

ChemComp-AMP:
ADENOSINE MONOPHOSPHATE / AMP*YM

ChemComp-PGE:
TRIETHYLENE GLYCOL

ChemComp-GOL:
GLYCEROL

ChemComp-SCN:
THIOCYANATE ION

Source
  • homo sapiens (human)
KeywordsHYDROLASE / DEAD-box / Helicase / DDX2A / RNA / Structural Genomics / Structural Genomics Consortium / SGC / DEAD / RNA helicase / Rossmann fold / Alternative initiation / ATP-binding / Developmental protein / Differentiation / mRNA transport / Nucleotide-binding / Nucleus / Phosphorylation / RNA-binding / Spermatogenesis / Translation regulation / Transport / CONSERVED DOMAIN I / DNA-binding / mRNA processing / mRNA splicing / Spliceosome / AMP / translation initiation / DEAD box / Host-virus interaction / Initiation factor / Protein biosynthesis / ADP / rRNA / Phosphoprotein / Methylation / REC-A-like / alpha-beta

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