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TitleNovel naphthalene-N-sulfonyl-D-glutamic acid derivatives as inhibitors of MurD, a key peptidoglycan biosynthesis enzyme.
Journal, issue, pagesJ. Med. Chem., Vol. 51, Page 7486-7494, Year 2008
Publish dateMar 6, 2007 (structure data deposition date)
AuthorsHumljan, J. / Kotnik, M. / Contreras-Martel, C. / Blanot, D. / Urleb, U. / Dessen, A. / Solmajer, T. / Gobec, S.
External linksJ. Med. Chem. / PubMed:19007109
MethodsX-ray diffraction
Resolution1.88 - 2.5 Å
Structure data

PDB-2uuo:
Crystal structure of MurD ligase in complex with D-Glu containing sulfonamide inhibitor
Method: X-RAY DIFFRACTION / Resolution: 2.5 Å

PDB-2uup:
Crystal structure of MurD ligase in complex with D-Glu containing sulfonamide inhibitor
Method: X-RAY DIFFRACTION / Resolution: 1.88 Å

PDB-2vtd:
Crystal structure of MurD ligase in complex with D-Glu containing sulfonamide inhibitor
Method: X-RAY DIFFRACTION / Resolution: 1.94 Å

PDB-2vte:
Crystal structure of MurD ligase in complex with D-Glu containing sulfonamide inhibitor
Method: X-RAY DIFFRACTION / Resolution: 2.2 Å

Chemicals

ChemComp-SO4:
SULFATE ION

ChemComp-LK3:
N-{[6-(PENTYLOXY)NAPHTHALEN-2-YL]SULFONYL}-D-GLUTAMIC ACID

ChemComp-HOH:
WATER

ChemComp-LK4:
N-({6-[(4-CYANOBENZYL)OXY]NAPHTHALEN-2-YL}SULFONYL)-D-GLUTAMIC ACID

ChemComp-LKM:
N-({6-[(4-CYANO-2-FLUOROBENZYL)OXY]NAPHTHALEN-2-YL}SULFONYL)-D-GLUTAMIC ACID

ChemComp-IK4:
N-({7-[(4-cyanobenzyl)oxy]naphthalen-2-yl}sulfonyl)-D-glutamic acid

Source
  • escherichia coli (E. coli)
KeywordsLIGASE / MURD-INHIBITOR COMPLEX / PEPTIDOGLYCAN SYNTHESIS / CELL WALL / CELL SHAPE / CELL CYCLE / NUCLEOTIDE-BINDING / SULFONAMIDE INHIBITOR / MURD LIGASE / ATP-BINDING / CELL DIVISION / CYTOPLASM / CELL WALL BIOGENESIS/DEGRADATION

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