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Structure paper

TitleCaught bending the a-rule: crystal structures of translesion DNA synthesis with a non-natural nucleotide.
Journal, issue, pagesBiochemistry, Vol. 46, Page 10551-10561, Year 2007
Publish dateFeb 22, 2007 (structure data deposition date)
AuthorsZahn, K.E. / Belrhali, H. / Wallace, S.S. / Doublie, S.
External linksBiochemistry / PubMed:17718515
MethodsX-ray diffraction
Resolution2.75 - 2.86 Å
Structure data

PDB-2oyq:
Crystal structure of RB69 gp43 in complex with DNA with 5-NIMP opposite an abasic site analog
Method: X-RAY DIFFRACTION / Resolution: 2.86 Å

PDB-2ozm:
Crystal structure of RB69 gp43 in complex with DNA with 5-NITP opposite an abasic site analog
Method: X-RAY DIFFRACTION / Resolution: 2.86 Å

PDB-2ozs:
Crystal structure of RB69 gp43 in complex with DNA with dATP opposite dTMP
Method: X-RAY DIFFRACTION / Resolution: 2.75 Å

PDB-2p5g:
Crystal structure of RB69 gp43 in complex with DNA with dAMP opposite an abasic site analog in a 21mer template
Method: X-RAY DIFFRACTION / Resolution: 2.8 Å

Chemicals

ChemComp-MG:
Unknown entry

ChemComp-N5P:
1-{2-DEOXY-5-O-[(R)-HYDROXY{[(R)-HYDROXY(PHOSPHONOOXY)PHOSPHORYL]OXY}PHOSPHORYL]-BETA-D-ERYTHRO-PENTOFURANOSYL}-5-NITRO

ChemComp-HOH:
WATER / Water

ChemComp-DTP:
2'-DEOXYADENOSINE 5'-TRIPHOSPHATE / Deoxyadenosine triphosphate

Source
  • enterobacteria phage rb69 (virus)
Keywordstransferase/DNA / DNA POLYMERASE / ABASIC SITE / DNA LESION / NUCLEOTIDE BINDING / 5-NITP / transferase-DNA COMPLEX / dATP / dAMP

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