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Structure paper

TitleCrystal Structures of DPP-IV (CD26) from Rat Kidney Exhibit Flexible Accommodation of Peptidase-Selective Inhibitors.
Journal, issue, pagesBiochemistry, Vol. 45, Page 7474-7482, Year 2006
Publish dateMar 10, 2006 (structure data deposition date)
AuthorsLongenecker, K.L. / Stewart, K.D. / Madar, D.J. / Jakob, C.G. / Fry, E.H. / Wilk, S. / Lin, C.W. / Ballaron, S.J. / Stashko, M.A. / Lubben, T.H. ...Longenecker, K.L. / Stewart, K.D. / Madar, D.J. / Jakob, C.G. / Fry, E.H. / Wilk, S. / Lin, C.W. / Ballaron, S.J. / Stashko, M.A. / Lubben, T.H. / Yong, H. / Pireh, D. / Pei, Z. / Basha, F. / Wiedeman, P.E. / Von Geldern, T.W. / Trevillyan, J.M. / Stoll, V.S.
External linksBiochemistry / PubMed:16768443
MethodsX-ray diffraction
Resolution2.8 - 3.3 Å
Structure data

PDB-2gbc:
Native DPP-IV (CD26) from Rat
Method: X-RAY DIFFRACTION / Resolution: 2.8 Å

PDB-2gbf:
rat dpp-IV with alkynyl cyanopyrrolidine #1
Method: X-RAY DIFFRACTION / Resolution: 3.1 Å

PDB-2gbg:
rat DPP-IV with alkynyl cyanopyrrolidine #2
Method: X-RAY DIFFRACTION / Resolution: 3 Å

PDB-2gbi:
rat DPP-IV with xanthine inhibitor 4
Method: X-RAY DIFFRACTION / Resolution: 3.3 Å

Chemicals

ChemComp-NAG:
2-acetamido-2-deoxy-beta-D-glucopyranose

ChemComp-HOH:
WATER

ChemComp-AIA:
(1S)-2-[(2S,5R)-2-(AMINOMETHYL)-5-ETHYNYLPYRROLIDIN-1-YL]-1-CYCLOPENTYL-2-OXOETHANAMINE

ChemComp-SO4:
SULFATE ION

ChemComp-1AD:
(1S)-2-[(2S,5R)-2-(AMINOMETHYL)-5-PROP-1-YN-1-YLPYRROLIDIN-1-YL]-1-CYCLOPENTYL-2-OXOETHANAMINE

ChemComp-XIH:
2-({8-[(3R)-3-AMINOPIPERIDIN-1-YL]-1,3-DIMETHYL-2,6-DIOXO-1,2,3,6-TETRAHYDRO-7H-PURIN-7-YL}METHYL)BENZONITRILE

Source
  • rattus norvegicus (Norway rat)
KeywordsHYDROLASE / beta propeller / serine peptidase beta propeller

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