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Structure paper

TitleStructural basis for inhibition of Escherichia coli uridine phosphorylase by 5-substituted acyclouridines.
Journal, issue, pagesActa Crystallogr. ,Sect. D, Vol. 61, Page 863-872, Year 2005
Publish dateJul 15, 2004 (structure data deposition date)
AuthorsBu, W. / Settembre, E.C. / el Kouni, M.H. / Ealick, S.E.
External linksActa Crystallogr. ,Sect. D / PubMed:15983408
MethodsX-ray diffraction
Resolution1.95 - 2.3 Å
Structure data

PDB-1u1c:
Structure of E. coli uridine phosphorylase complexed to 5-benzylacyclouridine (BAU)
Method: X-RAY DIFFRACTION / Resolution: 2.2 Å

PDB-1u1d:
Structure of e. coli uridine phosphorylase complexed to 5-(phenylthio)acyclouridine (ptau)
Method: X-RAY DIFFRACTION / Resolution: 2.001 Å

PDB-1u1e:
Structure of e. coli uridine phosphorylase complexed to 5(phenylseleno)acyclouridine (PSAU)
Method: X-RAY DIFFRACTION / Resolution: 2.001 Å

PDB-1u1f:
Structure of e. coli uridine phosphorylase complexed to 5-(m-(benzyloxy)benzyl)acyclouridine (BBAU)
Method: X-RAY DIFFRACTION / Resolution: 2.3 Å

PDB-1u1g:
Structure of E. coli uridine phosphorylase complexed to 5-(m-(benzyloxy)benzyl)barbituric acid (BBBA)
Method: X-RAY DIFFRACTION / Resolution: 1.95 Å

Chemicals

ChemComp-PO4:
PHOSPHATE ION

ChemComp-K:
Unknown entry

ChemComp-BAU:
1-((2-HYDROXYETHOXY)METHYL)-5-BENZYLPYRIMIDINE-2,4(1H,3H)-DIONE

ChemComp-HOH:
WATER

ChemComp-181:
1-((2-HYDROXYETHOXY)METHYL)-5-(PHENYLTHIO)PYRIMIDINE-2,4(1H,3H)-DIONE

ChemComp-182:
1-((2-HYDROXYETHOXY)METHYL)-5-(PHENYLSELANYL)PYRIMIDINE-2,4(1H,3H)-DIONE

ChemComp-183:
1-((2-HYDROXYETHOXY)METHYL)-5-(3-(BENZYLOXY)BENZYL)PYRIMIDINE-2,4(1H,3H)-DIONE

ChemComp-BBB:
1-((2-HYDROXYETHOXY)METHYL)-5-(3-(BENZYLOXY)BENZYL)-6-HYDROXYPYRIMIDINE-2,4(1H,3H)-DIONE

Source
  • escherichia coli (E. coli)
KeywordsTRANSFERASE / PYRIMIDINE NUCLEOSIDE PHOSPHORYLASE; URIDINE SALVAGE; benzylacyclouridine; BAU / PYRIMIDINE NUCLEOSIDE PHOSPHORYLASE; URIDINE SALVAGE; PTAU; 5-(PHENYLTHIO)ACYCLOURIDINE / PYRIMIDINE NUCLEOSIDE PHOSPHORYLASE; URIDINE SALVAGE; PSAU / 5-(PHENYLSELENO)ACYCLOURIDINE / PYRIMIDINE NUCLEOSIDE PHOSPHORYLASE; URIDINE SALVAGE; UDP; 5-(m-(BENZYLOXY)BENZYL)ACYCLOURIDINE; BBAU / PYRIMIDINE NUCLEOSIDE PHOSPHORYLASE; URIDINE SALVAGE; UDP; 5-(m-(BENZYLOXY)BENZYL)ACYCLOURIDINE; BBBA

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