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Structure paper

TitleOrientation of bound ligands in mannose-binding proteins. Implications for multivalent ligand recognition.
Journal, issue, pagesJ. Biol. Chem., Vol. 277, Page 16088-16095, Year 2002
Publish dateJan 30, 2002 (structure data deposition date)
AuthorsNg, K.K. / Kolatkar, A.R. / Park-Snyder, S. / Feinberg, H. / Clark, D.A. / Drickamer, K. / Weis, W.I.
External linksJ. Biol. Chem. / PubMed:11850428
MethodsX-ray diffraction
Resolution1.74 - 2.8 Å
Structure data

PDB-1kwt:
Rat mannose binding protein A (native, MPD)
Method: X-RAY DIFFRACTION / Resolution: 1.95 Å

PDB-1kwu:
Rat mannose binding protein A complexed with a-Me-Man
Method: X-RAY DIFFRACTION / Resolution: 1.95 Å

PDB-1kwv:
Rat mannose binding protein A complexed with a-Me-GlcNAc
Method: X-RAY DIFFRACTION / Resolution: 2 Å

PDB-1kww:
Rat mannose protein A complexed with a-Me-Fuc.
Method: X-RAY DIFFRACTION / Resolution: 1.9 Å

PDB-1kwx:
Rat mannose protein A complexed with b-Me-Fuc.
Method: X-RAY DIFFRACTION / Resolution: 2 Å

PDB-1kwy:
Rat mannose protein A complexed with man-a13-man.
Method: X-RAY DIFFRACTION / Resolution: 2 Å

PDB-1kwz:
Rat mannose protein A (H189V) complexed with Man-a13-Man
Method: X-RAY DIFFRACTION / Resolution: 1.9 Å

PDB-1kx0:
Rat mannose protein A (H189V I207V) complexed with man-a13-man
Method: X-RAY DIFFRACTION / Resolution: 2 Å

PDB-1kx1:
Rat mannose protein A complexed with Man6-GlcNAc2-Asn
Method: X-RAY DIFFRACTION / Resolution: 2.8 Å

PDB-1kza:
Complex of MBP-C and Man-a13-Man
Method: X-RAY DIFFRACTION / Resolution: 1.74 Å

PDB-1kzb:
Complex of MBP-C and trimannosyl core
Method: X-RAY DIFFRACTION / Resolution: 1.8 Å

PDB-1kzc:
Complex of MBP-C and high-affinity linear trimannose
Method: X-RAY DIFFRACTION / Resolution: 1.85 Å

PDB-1kzd:
Complex of MBP-C and GlcNAc-terminated core
Method: X-RAY DIFFRACTION / Resolution: 1.9 Å

PDB-1kze:
Complex of MBP-C and bivalent Man-terminated glycopeptide
Method: X-RAY DIFFRACTION / Resolution: 1.8 Å

Chemicals

ChemComp-CA:
Unknown entry

ChemComp-CL:
Unknown entry

ChemComp-HOH:
WATER

ChemComp-MMA:
methyl alpha-D-mannopyranoside

ChemComp-NAG:
2-acetamido-2-deoxy-beta-D-glucopyranose

ChemComp-MFU:
methyl alpha-L-fucopyranoside

ChemComp-MFB:
methyl beta-L-fucopyranoside

ChemComp-MAN:
alpha-D-mannopyranose

Source
  • rattus norvegicus (Norway rat)
KeywordsIMMUNE SYSTEM / SUGAR BINDING PROTEIN / LECTIN / C-TYPE LECTIN / CALCIUM-BINDING PROTEIN / protein-carbohydrate complex

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