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TitleMolecular Structure of the Na,K-ATPase α4β1 Isoform in Its Ouabain-Bound Conformation.
Journal, issue, pagesInt J Mol Sci, Vol. 25, Issue 22, Year 2024
Publish dateNov 19, 2024
AuthorsKazuhiro Abe / Jeff McDermott / Hridya Valia Madapally / Parthiban Marimuthu / Chai C Gopalasingam / Christoph Gerle / Hideki Shigematsu / Himanshu Khandelia / Gustavo Blanco /
PubMed AbstractNa,K-ATPase is the active ion transport system that maintains the electrochemical gradients for Na and K across the plasma membrane of most animal cells. Na,K-ATPase is constituted by the association ...Na,K-ATPase is the active ion transport system that maintains the electrochemical gradients for Na and K across the plasma membrane of most animal cells. Na,K-ATPase is constituted by the association of two major subunits, a catalytic α and a glycosylated β subunit, both of which exist as different isoforms (in mammals known as α1, α2, α3, α4, β1, β2 and β3). Na,K-ATPase α and β isoforms assemble in different combinations to produce various isozymes with tissue specific expression and distinct biochemical properties. Na,K-ATPase α4β1 is only found in male germ cells of the testis and is mainly expressed in the sperm flagellum, where it plays a critical role in sperm motility and male fertility. Here, we report the molecular structure of Na,K-ATPase α4β1 at 2.37 Å resolution in the ouabain-bound state and in the presence of beryllium fluoride. Overall, Na,K-ATPase α4 structure exhibits the basic major domains of a P-Type ATPase, resembling Na,K-ATPase α1, but has differences specific to its distinct sequence. Dissimilarities include the site where the inhibitor ouabain binds. Molecular simulations indicate that glycosphingolipids can bind to a putative glycosphingolipid binding site, which could potentially modulate Na,K-ATPase α4 activity. This is the first experimental evidence for the structure of Na,K-ATPase α4β1. These data provide a template that will aid in better understanding the function Na,K-ATPase α4β1 and will be important for the design and development of compounds that can modulate Na,K-ATPase α4 activity for the purpose of improving male fertility or to achieve male contraception.
External linksInt J Mol Sci / PubMed:39596464 / PubMed Central
MethodsEM (single particle)
Resolution2.37 Å
Structure data

EMDB-60570, PDB-8zyj:
Cryo-EM structure of human testis-specific Na+,K+-ATPase alpha4 in ouabain-bound form
Method: EM (single particle) / Resolution: 2.37 Å

Chemicals

ChemComp-MG:
Unknown entry

ChemComp-NA:
Unknown entry

ChemComp-CLR:
CHOLESTEROL

ChemComp-OBN:
OUABAIN

ChemComp-Q7G:
2-{[(4-O-alpha-D-glucopyranosyl-alpha-D-glucopyranosyl)oxy]methyl}-4-{[(3beta,9beta,14beta,17beta,25R)-spirost-5-en-3-yl]oxy}butyl 4-O-alpha-D-glucopyranosyl-alpha-D-glucopyranoside

ChemComp-PCW:
1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE / DOPC, phospholipid*YM

ChemComp-NAG:
2-acetamido-2-deoxy-beta-D-glucopyranose

ChemComp-HOH:
WATER

Source
  • homo sapiens (human)
KeywordsTRANSPORT PROTEIN / P-type ATPase / sodium pump / Na+ / K+-ATPase / testis / human

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