Database of articles cited by EMDB/PDB/SASBDB data

Keywords
Structure methods	All X-ray diffraction NMR electron microscopy small angle scattering neutron diffraction fiber diffraction powder diffraction infrared spectroscopy EPR fluorescence transfer theoretical model Hybrid
Author
Journal
IF	>30 >20 >10 >5 all

Title	The flagellar motor protein FliL forms a scaffold of circumferentially positioned rings required for stator activation.
Journal, issue, pages	Proc Natl Acad Sci U S A, Vol. 119, Issue 4, Year 2022
Publish date	Jan 25, 2022
Authors	Shoichi Tachiyama / Kar L Chan / Xiaolin Liu / Skander Hathroubi / Briana Peterson / Mohammad F Khan / Karen M Ottemann / Jun Liu / Anna Roujeinikova /
PubMed Abstract	The flagellar motor stator is an ion channel nanomachine that assembles as a ring of the MotAMotB units at the flagellar base. The role of accessory proteins required for stator assembly and ...The flagellar motor stator is an ion channel nanomachine that assembles as a ring of the MotAMotB units at the flagellar base. The role of accessory proteins required for stator assembly and activation remains largely enigmatic. Here, we show that one such assembly factor, the conserved protein FliL, forms an integral part of the flagellar motor in a position that colocalizes with the stator. Cryogenic electron tomography reconstructions of the intact motor in whole wild-type cells and cells lacking FliL revealed that the periplasmic domain of FliL (FliL-C) forms 18 circumferentially positioned rings integrated with the 18 MotAB units. FliL-C formed partial rings in the crystal, and the crystal structure-based full ring model was consistent with the shape of the rings observed in situ. Our data suggest that each FliL ring is coaxially sandwiched between the MotA ring and the dimeric periplasmic MotB moiety of the stator unit and that the central hole of the FliL ring has density that is consistent with the plug/linker region of MotB in its extended, active conformation. Significant structural similarities were found between FliL-C and stomatin/prohibitin/flotillin/HflK/C domains of scaffolding proteins, suggesting that FliL acts as a scaffold. The binding energy released upon association of FliL with the stator units could be used to power the release of the plug helices. The finding that isolated FliL-C forms stable partial rings provides an insight into the putative mechanism by which the FliL rings assemble around the stator units.
External links	Proc Natl Acad Sci U S A / PubMed:35046042 / PubMed Central
Methods	EM (subtomogram averaging) / X-ray diffraction
Resolution	2.1 - 25.0 Å
Structure data	EMDB-25123: Focused refinement structure of Helicobacter pylori flagellar motor Method: EM (subtomogram averaging) / Resolution: 24.0 Å EMDB-25124: Focused refinement structure of flagellar motor from Helicobacter pylori fliL mutant Method: EM (subtomogram averaging) / Resolution: 25.0 Å PDB-7sgn: Crystal structure of periplasmic domain of Helicobacter pylori FliL (residues 81 to 183) (crystal form A) Method: X-RAY DIFFRACTION / Resolution: 2.8 Å PDB-7sgo: Crystal structure of periplasmic domain of Helicobacter pylori FliL (residues 81 to 183) (crystal form B) Method: X-RAY DIFFRACTION / Resolution: 2.695 Å PDB-7sgp: Crystal structure of periplasmic domain of Helicobacter pylori FliL (residues 81 to 183) (crystal form C) Method: X-RAY DIFFRACTION / Resolution: 2.1 Å
Chemicals	ChemComp-HOH: WATER
Source	Helicobacter pylori SS1 (bacteria) helicobacter pylori (bacteria)
Keywords	MOTOR PROTEIN / Flagellar motor / FliL