EMDB/PDB/SASBDBから引用されている文献のデータベース

キーワード
構造解析手法	All X線回折 NMR 電子顕微鏡小角散乱中性子線回折線維回折粉末回折赤外分光 EPR FRET 理論モデルハイブリッド
著者・登録者
ジャーナル
IF	>30 >20 >10 >5 all

タイトル	Structural basis for Tpt1-catalyzed 2'-PO 4 transfer from RNA and NADP(H) to NAD.
ジャーナル・号・ページ	Proc. Natl. Acad. Sci. USA, Vol. 120, Page e2312999120-e2312999120, Year 2023
掲載日	2023年7月11日 (構造データの登録日)
著者	Jacewicz, A. / Dantuluri, S. / Shuman, S.
リンク	Proc. Natl. Acad. Sci. USA / PubMed:37883434
手法	X線回折
解像度	1.37 - 2.06 Å
構造データ	PDB-8tfi: tRNA 2'-phosphotransferase (Tpt1) from Pyrococcus horikoshii 手法: X-RAY DIFFRACTION / 解像度: 1.97 Å PDB-8tfx: tRNA 2'-phosphotransferase (Tpt1) from Pyrococcus horikoshii in complex with 2',5'-ADP 手法: X-RAY DIFFRACTION / 解像度: 1.7 Å PDB-8tfy: tRNA 2'-phosphotransferase (Tpt1) from Pyrococcus horikoshii in complex with NADP 手法: X-RAY DIFFRACTION / 解像度: 1.54 Å PDB-8tfz: tRNA 2'-phosphotransferase (Tpt1) from Pyrococcus horikoshii in complex with NAD 手法: X-RAY DIFFRACTION / 解像度: 2.06 Å PDB-8tg3: tRNA 2'-phosphotransferase (Tpt1) from Aeropyrum pernix in complex with ADP-ribose-1" -phosphate 手法: X-RAY DIFFRACTION / 解像度: 1.47 Å PDB-8tg4: tRNA 2'-phosphotransferase (Tpt1) from Aeropyrum pernix in complex with ADP-ribose-2"-phosphate and 2'-OH RNA 手法: X-RAY DIFFRACTION / 解像度: 1.37 Å PDB-8tg5: tRNA 2'-phosphotransferase (Tpt1) from Pyrococcus horikoshii in complex with branched 2'-PO4 RNA 手法: X-RAY DIFFRACTION / 解像度: 2.0 Å PDB-8tg6: tRNA 2'-phosphotransferase (Tpt1) from Aeropyrum pernix in complex with sulfate anions 手法: X-RAY DIFFRACTION / 解像度: 1.6 Å
化合物	ChemComp-CL: Unknown entry / クロリド ChemComp-HOH: WATER ChemComp-A2P: ADENOSINE-2'-5'-DIPHOSPHATE / 2′,5′-ADP ChemComp-EDO: 1,2-ETHANEDIOL / エチレングリコ-ル ChemComp-GOL: GLYCEROL / グリセロ-ル ChemComp-K: Unknown entry / カリウムカチオン ChemComp-NAP: NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE ChemComp-NAD: NICOTINAMIDE-ADENINE-DINUCLEOTIDE / NADYM ChemComp-HQG: [[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] [(2~{R},3~{S},4~{R},5~{R})-3,4-bis(oxidanyl)-5-phosphonooxy-oxolan-2-yl]methyl hydrogen phosphate / Appr-1′′p ChemComp-NO3: NITRATE ION ChemComp-PEG: DI(HYDROXYETHYL)ETHER / ジエチレングリコ-ル ChemComp-9SO: [(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-3,4-dihydroxyoxolan-2-yl]methyl [(2R,3R,4R,5R)-3,5-dihydroxy-4-(phosphonooxy)oxolan-2-yl]methyl dihydrogen diphosphate (non-preferred name) 化合物画像なし ChemComp-9S2: Unknown entry ChemComp-SO4*: SULFATE ION / 硫酸ジアニオン
由来	pyrococcus horikoshii ot3 (古細菌) aeropyrum pernix (古細菌) synthetic construct (人工物)
キーワード	TRANSFERASE / tRNA 2'-PHOSPHOTRANSFERASE / TPT1 / tRNA SPLICING / 2' / 5'-ADP / NADP / NAD / ADP-ribose-1"-phosphate / Aeropyrum pernix / ADP-ribose-2"-phosphate / branched RNA / 2'-PO4 RNA / sulphate ions