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-Structure paper
タイトル | Structural basis of TRPV1 modulation by endogenous bioactive lipids. |
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ジャーナル・号・ページ | Nat Struct Mol Biol, Vol. 31, Issue 9, Page 1377-1385, Year 2024 |
掲載日 | 2024年5月2日 |
著者 | William R Arnold / Adamo Mancino / Frank R Moss / Adam Frost / David Julius / Yifan Cheng / |
PubMed 要旨 | TRP ion channels are modulated by phosphoinositide lipids, but the underlying structural mechanisms remain unclear. The capsaicin- and heat-activated receptor, TRPV1, has served as a model for ...TRP ion channels are modulated by phosphoinositide lipids, but the underlying structural mechanisms remain unclear. The capsaicin- and heat-activated receptor, TRPV1, has served as a model for deciphering lipid modulation, which is relevant to understanding how pro-algesic agents enhance channel activity in the setting of inflammatory pain. Identification of a pocket within the TRPV1 transmembrane core has provided initial clues as to how phosphoinositide lipids bind to and regulate the channel. Here we show that this regulatory pocket in rat TRPV1 can accommodate diverse lipid species, including the inflammatory lipid lysophosphatidic acid, whose actions are determined by their specific modes of binding. Furthermore, we show that an empty-pocket channel lacking an endogenous phosphoinositide lipid assumes an agonist-like state, even at low temperature, substantiating the concept that phosphoinositide lipids serve as negative TRPV1 modulators whose ejection from the binding pocket is a critical step toward activation by thermal or chemical stimuli. |
リンク | Nat Struct Mol Biol / PubMed:38698206 / PubMed Central |
手法 | EM (単粒子) |
解像度 | 2.2 - 3.7 Å |
構造データ | EMDB-40940, PDB-8t0c: EMDB-40941, PDB-8t0e: EMDB-40949, PDB-8t0y: EMDB-40951, PDB-8t10: EMDB-41005, PDB-8t3l: EMDB-41006, PDB-8t3m: EMDB-41847, PDB-8u2z: EMDB-41848, PDB-8u30: EMDB-41855, PDB-8u3a: EMDB-41857, PDB-8u3c: EMDB-41864, PDB-8u3j: EMDB-41866, PDB-8u3l: EMDB-41873, PDB-8u43: EMDB-41879, PDB-8u4d: |
化合物 | ChemComp-NKN: ChemComp-NA: ChemComp-8IJ: ChemComp-HOH: ChemComp-85R: ChemComp-PIO: ChemComp-PCW: ChemComp-CLR:
ChemComp-VPN: ChemComp-3PH:
ChemComp-V5H: |
由来 |
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キーワード | MEMBRANE PROTEIN / TRPV1 / lysophosphatidic acid / TRPV1 in nanodisc bound with one LPA in one monomer / TRPV1 in nanodisc bound with two LPA molecules in opposite monomers / TRPV1 in nanodisc bound with diC8-PIP2 in the dilated state / TRPV1 in nanodisc bound with diC8-PIP2 in the closed state / TRPV1 in nanodisc bound with PI-Br4 bound in Conformation 1 (monomer) / TRPV1 in nanodisc bound with PI-Br4 bound in Conformation 2 (monomer) / TRPV1 in nanodisc bound with empty vanilloid binding pocket at 4C / TRPV1 in nanodisc bound with empty vanilloid binding pocket at 25C / TRPV1 in nanodisc bound with PIP2-Br4 MEMBRANE PROTEIN / TRPV1 in nanodisc bound with PI-Br4 / consensus structure MEMBRANE PROTEIN |